| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610901
Identifier: 121610901
GI number: 121610901
Start: 4371507
End: 4371926
Strand: Direct
Name: 121610901
Synonym: Veis_3983
Alternate gene names: NA
Gene position: 4371507-4371926 (Clockwise)
Preceding gene: 121610900
Following gene: 121610903
Centisome position: 78.53
GC content: 64.52
Gene sequence:
>420_bases ATGAAGATTGACCTTCCCGAACGCAAGAAGCTGGTTCATGAAATGCGCTTTCCGGTGCGCTGGGGCGACATGGATGCGAT GGGCCATGTCAACAACACGGTGTATTTCCGCTACCTGGAGACGGCGCGCATCGACTGGATGGTGGCAATGGGCTGCCGCC CGGACCCGGACGGGCAGGGGCCGGTCATCGCCCACGCATTTTGCAACTTCTACCACCAGCTCGAATACCCGGCGGATGTG CTGCTGCGGATGTACGTCAGCGACCCGGGGCGCACCACGTTCGAGACCTGGGGCACGATGGAGCGGCAAAGCCAGCCCGG CGTGATTTGCGCGGCCGGCGGCGCCACCACCATCTGGGTGGACTTCAGGCAGTCCAAGGCCGTGCCCCTGCCCGACTGGA TGCGGGCGCTGGTGGAGTGA
Upstream 100 bases:
>100_bases GTTTTTCCGGAGCGGCCACTGGCCCGTGGCCCGCGCCCGCGCAGTAGGCGGCCACGGCACGGTTCACCGCTGGCATCCTC GCATCCACCAAGGCACACCG
Downstream 100 bases:
>100_bases CCCCCCCCCGCAGCGCCAGCGGGCGCGGGCGCGGGCTTGGGGCGCACGCTGCGGCAAACCCCGTCATGGATGCCATTGGC CGGGCCGCGCGGACGACGAC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Thiesterase; Thioesterase Family Protein Domain Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQGPVIAHAFCNFYHQLEYPADV LLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWVDFRQSKAVPLPDWMRALVE
Sequences:
>Translated_139_residues MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQGPVIAHAFCNFYHQLEYPADV LLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWVDFRQSKAVPLPDWMRALVE >Mature_139_residues MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQGPVIAHAFCNFYHQLEYPADV LLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWVDFRQSKAVPLPDWMRALVE
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16010; Mature: 16010
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQG CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCC PVIAHAFCNFYHQLEYPADVLLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWV CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEECCCCEEEEE DFRQSKAVPLPDWMRALVE EECCCCCCCCHHHHHHHCC >Mature Secondary Structure MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQG CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCC PVIAHAFCNFYHQLEYPADVLLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWV CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEECCCCEEEEE DFRQSKAVPLPDWMRALVE EECCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA