Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610901

Identifier: 121610901

GI number: 121610901

Start: 4371507

End: 4371926

Strand: Direct

Name: 121610901

Synonym: Veis_3983

Alternate gene names: NA

Gene position: 4371507-4371926 (Clockwise)

Preceding gene: 121610900

Following gene: 121610903

Centisome position: 78.53

GC content: 64.52

Gene sequence:

>420_bases
ATGAAGATTGACCTTCCCGAACGCAAGAAGCTGGTTCATGAAATGCGCTTTCCGGTGCGCTGGGGCGACATGGATGCGAT
GGGCCATGTCAACAACACGGTGTATTTCCGCTACCTGGAGACGGCGCGCATCGACTGGATGGTGGCAATGGGCTGCCGCC
CGGACCCGGACGGGCAGGGGCCGGTCATCGCCCACGCATTTTGCAACTTCTACCACCAGCTCGAATACCCGGCGGATGTG
CTGCTGCGGATGTACGTCAGCGACCCGGGGCGCACCACGTTCGAGACCTGGGGCACGATGGAGCGGCAAAGCCAGCCCGG
CGTGATTTGCGCGGCCGGCGGCGCCACCACCATCTGGGTGGACTTCAGGCAGTCCAAGGCCGTGCCCCTGCCCGACTGGA
TGCGGGCGCTGGTGGAGTGA

Upstream 100 bases:

>100_bases
GTTTTTCCGGAGCGGCCACTGGCCCGTGGCCCGCGCCCGCGCAGTAGGCGGCCACGGCACGGTTCACCGCTGGCATCCTC
GCATCCACCAAGGCACACCG

Downstream 100 bases:

>100_bases
CCCCCCCCCGCAGCGCCAGCGGGCGCGGGCGCGGGCTTGGGGCGCACGCTGCGGCAAACCCCGTCATGGATGCCATTGGC
CGGGCCGCGCGGACGACGAC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Thiesterase; Thioesterase Family Protein Domain Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQGPVIAHAFCNFYHQLEYPADV
LLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWVDFRQSKAVPLPDWMRALVE

Sequences:

>Translated_139_residues
MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQGPVIAHAFCNFYHQLEYPADV
LLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWVDFRQSKAVPLPDWMRALVE
>Mature_139_residues
MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQGPVIAHAFCNFYHQLEYPADV
LLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWVDFRQSKAVPLPDWMRALVE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16010; Mature: 16010

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQG
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCC
PVIAHAFCNFYHQLEYPADVLLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWV
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEECCCCEEEEE
DFRQSKAVPLPDWMRALVE
EECCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKIDLPERKKLVHEMRFPVRWGDMDAMGHVNNTVYFRYLETARIDWMVAMGCRPDPDGQG
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCC
PVIAHAFCNFYHQLEYPADVLLRMYVSDPGRTTFETWGTMERQSQPGVICAAGGATTIWV
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEEEECCCCEEEEE
DFRQSKAVPLPDWMRALVE
EECCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA