| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610888
Identifier: 121610888
GI number: 121610888
Start: 4355437
End: 4355733
Strand: Direct
Name: 121610888
Synonym: Veis_3970
Alternate gene names: NA
Gene position: 4355437-4355733 (Clockwise)
Preceding gene: 121610881
Following gene: 121610889
Centisome position: 78.24
GC content: 59.93
Gene sequence:
>297_bases ATGCTCCTGATTCCCGACGAAGCGACCGTTCGGCACAATGCCCGCCCGCAAGCCAAAAGCGTCGAATGTAGTGGGGCCTA TTCGGCGCAGAGCGTCCGTTGGCGACATGTTCTTGTTCGTTGGCGACTATCCGTAAAAACCACTAGTGTCGCGTCACGGA TCAGATGTCGTAGGCTGCGCGCAGCCATCGGAGTGCAGCGCAAGGCGCATCGCGCAGCCAATACCGAGCGTATTGGCAAG CGATGCAACGCCGCGATGCGCTTCGATGGCCAGCGCAGACCGACAGATGATCGGTGA
Upstream 100 bases:
>100_bases TTGCGGCAACTCGCCGGCTCCGGCTCGGCAAATGATGGGCTCGACCACGCAACAAGCAAGGCCGCACACCCGAATGCAGC AAATTTTTTCAACGCCATGA
Downstream 100 bases:
>100_bases CGCGACACTAGCCCACTGCGTCAATGCATTGGCATCAGTCGAATGCGCCGCGATGGATCGCCGCACTTTCACTTGCCGGG CGGGGCCTCCTCGTTGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MLLIPDEATVRHNARPQAKSVECSGAYSAQSVRWRHVLVRWRLSVKTTSVASRIRCRRLRAAIGVQRKAHRAANTERIGK RCNAAMRFDGQRRPTDDR
Sequences:
>Translated_98_residues MLLIPDEATVRHNARPQAKSVECSGAYSAQSVRWRHVLVRWRLSVKTTSVASRIRCRRLRAAIGVQRKAHRAANTERIGK RCNAAMRFDGQRRPTDDR >Mature_98_residues MLLIPDEATVRHNARPQAKSVECSGAYSAQSVRWRHVLVRWRLSVKTTSVASRIRCRRLRAAIGVQRKAHRAANTERIGK RCNAAMRFDGQRRPTDDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11237; Mature: 11237
Theoretical pI: Translated: 12.28; Mature: 12.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPDEATVRHNARPQAKSVECSGAYSAQSVRWRHVLVRWRLSVKTTSVASRIRCRRLR CEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAIGVQRKAHRAANTERIGKRCNAAMRFDGQRRPTDDR HHHHHHHHHHHHCCHHHHHHHCCHHHCCCCCCCCCCCC >Mature Secondary Structure MLLIPDEATVRHNARPQAKSVECSGAYSAQSVRWRHVLVRWRLSVKTTSVASRIRCRRLR CEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AAIGVQRKAHRAANTERIGKRCNAAMRFDGQRRPTDDR HHHHHHHHHHHHCCHHHHHHHCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA