Click here to switch to the map view.

The map label for this gene is paaI [H]

Identifier: 121610861

GI number: 121610861

Start: 4328920

End: 4329378

Strand: Direct

Name: paaI [H]

Synonym: Veis_3943

Alternate gene names: 121610861

Gene position: 4328920-4329378 (Clockwise)

Preceding gene: 121610860

Following gene: 121610862

Centisome position: 77.76

GC content: 69.72

Gene sequence:

>459_bases
ATGCCTTGCTCCACCGACAGACCCAACCCCCAGGCCGTGGCCGACCATGTGCGCAGCGGCATGCTGGCCAAGGACCGCGC
CACCCGGGGCCTGGGCATCCGCGTCACGGCCATGGGGCCGGGGCAGGCCACGCTGGAGATGGTGGTGCGCGCCGACATGC
TCAACGGCTTCGACATCTGCCACGGCGGCTTCATCACCGTGCTGGCCGATTCGGCGTTTGCCTTCGCTTGCAACTCGCGC
AACGTCCTGACCGTGGCCAGCGGCCTGGACATCGATTTTCTGGCGCCCGCGCATGAAGGCGACCATCTGACGGCCGAGGC
CACCGAGGTCGCGCTGGGCGGGCGCACCGGCTTGTACGACGTGAGCGTGCGCAATCAGCACCATCAGGCCATCGCCGTCT
TGCGCGGGCGTTCGTACTGCATGCCGGGCCGGCCGACCGTGCCGCTGGACGCCGGCTGA

Upstream 100 bases:

>100_bases
GCCATGCAGCAAACGCTGGGCGCCGGTGCCGATTACCGCGAAGGCGTCGCGGCCTTCGCCGGCAAGCGCGCCCCTCGTTT
CACCGAGCGTTGAGCAGACC

Downstream 100 bases:

>100_bases
TGGCTGACGGCCGACGAATGACGATTCGCTGAACGACAGGAGACTGCGCCATGGCCGTGCGTCAACCCGCTCCCGCTGCC
CTGGATCCGATGGAAAGCGC

Product: phenylacetic acid degradation protein PaaD

Products: NA

Alternate protein names: Phenylacetic acid degradation protein PaaI [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPCSTDRPNPQAVADHVRSGMLAKDRATRGLGIRVTAMGPGQATLEMVVRADMLNGFDICHGGFITVLADSAFAFACNSR
NVLTVASGLDIDFLAPAHEGDHLTAEATEVALGGRTGLYDVSVRNQHHQAIAVLRGRSYCMPGRPTVPLDAG

Sequences:

>Translated_152_residues
MPCSTDRPNPQAVADHVRSGMLAKDRATRGLGIRVTAMGPGQATLEMVVRADMLNGFDICHGGFITVLADSAFAFACNSR
NVLTVASGLDIDFLAPAHEGDHLTAEATEVALGGRTGLYDVSVRNQHHQAIAVLRGRSYCMPGRPTVPLDAG
>Mature_151_residues
PCSTDRPNPQAVADHVRSGMLAKDRATRGLGIRVTAMGPGQATLEMVVRADMLNGFDICHGGFITVLADSAFAFACNSRN
VLTVASGLDIDFLAPAHEGDHLTAEATEVALGGRTGLYDVSVRNQHHQAIAVLRGRSYCMPGRPTVPLDAG

Specific function: Thioesterase with a preference for ring-hydroxylated phenylacetyl-CoA esters. Hydrolyzes 3,4-dihydroxyphenylacetyl-CoA, 3-hydroxyphenylacetyl-CoA and 4-hydroxyphenylacetyl-CoA. Inactive towards 4-hydroxybenzoyl-CoA and 4-hydroxyphenacyl-CoA [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787662, Length=126, Percent_Identity=44.4444444444444, Blast_Score=109, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011973
- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16028; Mature: 15897

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCSTDRPNPQAVADHVRSGMLAKDRATRGLGIRVTAMGPGQATLEMVVRADMLNGFDIC
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEC
HGGFITVLADSAFAFACNSRNVLTVASGLDIDFLAPAHEGDHLTAEATEVALGGRTGLYD
CCCEEEEEECCEEEEEECCCCEEEEECCCCEEEECCCCCCCEEEECCEEEEECCCCCEEE
VSVRNQHHQAIAVLRGRSYCMPGRPTVPLDAG
EEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PCSTDRPNPQAVADHVRSGMLAKDRATRGLGIRVTAMGPGQATLEMVVRADMLNGFDIC
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEC
HGGFITVLADSAFAFACNSRNVLTVASGLDIDFLAPAHEGDHLTAEATEVALGGRTGLYD
CCCEEEEEECCEEEEEECCCCEEEEECCCCEEEECCCCCCCEEEECCEEEEECCCCCEEE
VSVRNQHHQAIAVLRGRSYCMPGRPTVPLDAG
EEECCCCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]