| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is dam [C]
Identifier: 121610681
GI number: 121610681
Start: 4152820
End: 4153647
Strand: Direct
Name: dam [C]
Synonym: Veis_3758
Alternate gene names: 121610681
Gene position: 4152820-4153647 (Clockwise)
Preceding gene: 121610680
Following gene: 121610682
Centisome position: 74.6
GC content: 62.44
Gene sequence:
>828_bases ATGACTGCGCCTGCCCGCCCGGTGCTGCGCTACCACGGCGGCAAATGGCGCCTGGCGCCGTGGATCATCGGTCATTTTCC GGCCCACCGGGTCTATGTCGAGCCGTTCGGTGGCGCCGGCTCGGTGTTGCTGCGCAAGCCGCGCGCATACGCCGAGGTCT ACAACGATCTGGATGGCGAGTTGGTCAACTTGTTCCATGTGGCCCGCGACCGAGGTCCGGCGCTCAGTCAAGCCCTGCGC TTGACGCCGTTTGCCCGGCGCGAATTCATCGACAGCTATCAGCCGAGCAGTGATTGTCTGGAGCAGGCGCGGCGCACGGT TGTGCGCTCGTTCATGGGGTTTGGCTCGAACTCGCACAACAAGCGCTCGGGCTTCAGAAACAACTCGAACCGCTGCGGCA CCACGCCAGCGCACGACTGGGCCAACTACCCGCAGGCCCTCGAGCAGGTCATCGACAGGCTGCGCGGTGTTGTCATCGAG AGCAAGGATGCCGTCTCGCTCATCGGGCAGATGGATGGAGATGGCACTCTTTTCTACGTGGATCCGCCCTATGTCTTATC CACCCGGGACAAGGGCCACGATTACCGGCACGAGATGACCGATGCAGATCACGAGAGCCTGGCGCAAACCCTGCATCGGG TCAAAGGCTTCGTGGTTCTCAGCGGCTACCCGAATCGGCTCTATGCGCGGCTTTTTCCGGATTGGCAGTGCATCGAACGC CATGTGTTTGCCGATGGCGCCAGACAGCGCGTCGAGTGCCTTTGGCTGAATCCGCCTTGCAGTGCCGCGCTGATCGGGCA GCAGGCGCAACAAAGGTTGATTGCATGA
Upstream 100 bases:
>100_bases GCGTCGAGTGGTCCAAGACCACCCGCGGCGGGCGCCAGTTTGATCTGCTCGCCGACTTGGACGCCCCGGCGGCCTGCGCA TCGGCTTACGGGCTTTGCGA
Downstream 100 bases:
>100_bases GCGCGCAAAGTCTGCCGATTGTCCGCGACAACGCCCGCCCGCTGCCGGGGTTGCACAAGGGGCCGCCAATGACCTCCACC ACAGAGTGTGAGCAATGCCA
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: DNA Adenine Methylase; Methyltransferase; N6 Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; DNA Adenine Methyltransferase; Adenine-Specific DNA Methyltransferase; Methylase; Site-Specific DNA-Methyltransferase; Adenine Specific DNA Methyltransferase; Phage Methylase; Type II DNA Methyltransferase; DNA Adenine Methylase Subfamily; Phage Associated Type II DNA-Methyltransferase; Phage-Related Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; DNA Methyltransferase; Prophage; Prophage DNA Methylase; Phage DNA Methylase
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGELVNLFHVARDRGPALSQALR LTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHNKRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIE SKDAVSLIGQMDGDGTLFYVDPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA
Sequences:
>Translated_275_residues MTAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGELVNLFHVARDRGPALSQALR LTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHNKRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIE SKDAVSLIGQMDGDGTLFYVDPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA >Mature_274_residues TAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGELVNLFHVARDRGPALSQALRL TPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHNKRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIES KDAVSLIGQMDGDGTLFYVDPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIERH VFADGARQRVECLWLNPPCSAALIGQQAQQRLIA
Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 31145; Mature: 31013
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGE CCCCCCCHHHHCCCCEEECCHHEECCCCCEEEEECCCCCCCCEEECCHHHHHHHHCCCHH LVNLFHVARDRGPALSQALRLTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHN HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC KRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIESKDAVSLIGQMDGDGTLFYV CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCEEECCCHHHHHHHCCCCCEEEEEE DPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER CCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCHHHHHH HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGE CCCCCCHHHHCCCCEEECCHHEECCCCCEEEEECCCCCCCCEEECCHHHHHHHHCCCHH LVNLFHVARDRGPALSQALRLTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHN HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC KRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIESKDAVSLIGQMDGDGTLFYV CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCEEECCCHHHHHHHCCCCCEEEEEE DPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER CCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCHHHHHH HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA