| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610667
Identifier: 121610667
GI number: 121610667
Start: 4138566
End: 4139495
Strand: Direct
Name: 121610667
Synonym: Veis_3743
Alternate gene names: NA
Gene position: 4138566-4139495 (Clockwise)
Preceding gene: 121610666
Following gene: 121610668
Centisome position: 74.34
GC content: 67.74
Gene sequence:
>930_bases ATGCAAACCAAAACCCACAACGGCGATGACCGTTCCGATGTCGAAGATGTCGCGGCGGCGATCCGCGAAGGCCGCAGCCT GCGCGCGGCGGCGCTCTACCGGATCGTCGTCTTGGACGACCAGCTCAATGAGCGCAACATCGATCTCACCGATCCGGTGC CGACCGCGCGCCAGATCCTCCAGGCCGCCGGCTTGCGCCCGGGCGACGGCTACAGTGTCTACGCGATCCTGACCTCCGGC GAGTTCGAGGACCTGCGCCTGGACGAAACCTACGATCTGCGCGGCCGCGGCGCGGAGCGCTTCGTCATCTTCCAGACCGA CCGCTCGTTCAAGTTCACGATCGACGACCGCCAACTGGAGTGGGGCAAGCCCAGCATCAGCGGCCGCGTGCTCAAGGCGC TGGCCGGCGTCCCGCCGGAGACCTACGACGTCTACCTCGAAGTGCGCGGCGGCGGTCAGGATGTCCTGATCCGCGACGGC GACCTGATCGATCTGGGCAAGCCGGGCATCGAGCGCTTCATCACGCTGATCCGAGACACCACGGAGGGCCTGCTCGCGCT GCCCGACGCGGACGAGCGCTATCTGAGCAGCCACGGCGTGGTCTTCGAGACAGTGAGCGACGGTGCGCACACGGGCGTCA TCTTCAAGCAGCTGCCGCTGCCCGCCGGAAAGTTCAACCACGCCGCGGCCGACGTGCTCGTTCTCCTGCCGCCCGGCTAT CCCGATGTCGCGCCGGACATGTTCTATTGCGACCCCTGGCTGACGCTGCAAAGCGTGGGGCGCTGCCCGACCTGCGCCGA CCAGGCCCACGCGTTCCAGGGTCACAGCTGGCAGCGCTGGTCGCGCCACAACACGGCGTGGCGGCCGGGCATCGACGGCC TGCACACCATGCTCAAGCGCATCGAGCACGCCATGGCGGAGGCGAAGTGA
Upstream 100 bases:
>100_bases ACCGGCCTTTCCGGTCTGGCTTTGGGCTGCGATTGACTGAGTAAGGAGGCCAGAAAGCCTGCAATCCAGCAGGTGATGGC TCCCCAAGAAAGGCAATCAA
Downstream 100 bases:
>100_bases TGTCGGCGGCTGCTCTGGACATTGTCTTGCTGGAGCCGCACGAGGCGGCCCTGCGCTCGCTGCTGCACAGGGATGACGGG GCCGAGGCGTCCGCCTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MQTKTHNGDDRSDVEDVAAAIREGRSLRAAALYRIVVLDDQLNERNIDLTDPVPTARQILQAAGLRPGDGYSVYAILTSG EFEDLRLDETYDLRGRGAERFVIFQTDRSFKFTIDDRQLEWGKPSISGRVLKALAGVPPETYDVYLEVRGGGQDVLIRDG DLIDLGKPGIERFITLIRDTTEGLLALPDADERYLSSHGVVFETVSDGAHTGVIFKQLPLPAGKFNHAAADVLVLLPPGY PDVAPDMFYCDPWLTLQSVGRCPTCADQAHAFQGHSWQRWSRHNTAWRPGIDGLHTMLKRIEHAMAEAK
Sequences:
>Translated_309_residues MQTKTHNGDDRSDVEDVAAAIREGRSLRAAALYRIVVLDDQLNERNIDLTDPVPTARQILQAAGLRPGDGYSVYAILTSG EFEDLRLDETYDLRGRGAERFVIFQTDRSFKFTIDDRQLEWGKPSISGRVLKALAGVPPETYDVYLEVRGGGQDVLIRDG DLIDLGKPGIERFITLIRDTTEGLLALPDADERYLSSHGVVFETVSDGAHTGVIFKQLPLPAGKFNHAAADVLVLLPPGY PDVAPDMFYCDPWLTLQSVGRCPTCADQAHAFQGHSWQRWSRHNTAWRPGIDGLHTMLKRIEHAMAEAK >Mature_309_residues MQTKTHNGDDRSDVEDVAAAIREGRSLRAAALYRIVVLDDQLNERNIDLTDPVPTARQILQAAGLRPGDGYSVYAILTSG EFEDLRLDETYDLRGRGAERFVIFQTDRSFKFTIDDRQLEWGKPSISGRVLKALAGVPPETYDVYLEVRGGGQDVLIRDG DLIDLGKPGIERFITLIRDTTEGLLALPDADERYLSSHGVVFETVSDGAHTGVIFKQLPLPAGKFNHAAADVLVLLPPGY PDVAPDMFYCDPWLTLQSVGRCPTCADQAHAFQGHSWQRWSRHNTAWRPGIDGLHTMLKRIEHAMAEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34338; Mature: 34338
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKTHNGDDRSDVEDVAAAIREGRSLRAAALYRIVVLDDQLNERNIDLTDPVPTARQIL CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHH QAAGLRPGDGYSVYAILTSGEFEDLRLDETYDLRGRGAERFVIFQTDRSFKFTIDDRQLE HHCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEE WGKPSISGRVLKALAGVPPETYDVYLEVRGGGQDVLIRDGDLIDLGKPGIERFITLIRDT CCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCEEECCCHHHHHHHHHHHHC TEGLLALPDADERYLSSHGVVFETVSDGAHTGVIFKQLPLPAGKFNHAAADVLVLLPPGY CCCEEECCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCC PDVAPDMFYCDPWLTLQSVGRCPTCADQAHAFQGHSWQRWSRHNTAWRPGIDGLHTMLKR CCCCCCCEEECCCHHHHHCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHH IEHAMAEAK HHHHHHCCC >Mature Secondary Structure MQTKTHNGDDRSDVEDVAAAIREGRSLRAAALYRIVVLDDQLNERNIDLTDPVPTARQIL CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHH QAAGLRPGDGYSVYAILTSGEFEDLRLDETYDLRGRGAERFVIFQTDRSFKFTIDDRQLE HHCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEE WGKPSISGRVLKALAGVPPETYDVYLEVRGGGQDVLIRDGDLIDLGKPGIERFITLIRDT CCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEECCCEEECCCHHHHHHHHHHHHC TEGLLALPDADERYLSSHGVVFETVSDGAHTGVIFKQLPLPAGKFNHAAADVLVLLPPGY CCCEEECCCCHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCC PDVAPDMFYCDPWLTLQSVGRCPTCADQAHAFQGHSWQRWSRHNTAWRPGIDGLHTMLKR CCCCCCCEEECCCHHHHHCCCCCCCHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHH IEHAMAEAK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA