Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610664

Identifier: 121610664

GI number: 121610664

Start: 4133665

End: 4134444

Strand: Direct

Name: 121610664

Synonym: Veis_3740

Alternate gene names: NA

Gene position: 4133665-4134444 (Clockwise)

Preceding gene: 121610663

Following gene: 121610665

Centisome position: 74.26

GC content: 60.0

Gene sequence:

>780_bases
ATGCCGGAACCGTTGAAGAGCAAAGACAAACACGGGGCGCCGTTCACACGGCCGCCCGAGATCGAGGCATCCTTGGGAAG
GCTGGAGGCGGTCGATGCTGCGGCACGCCTGCAGGCCTTCGCTGTCGCGTCGAGGAAGAGCAGCGGCTATGTGCCGTCGG
AAGCGCTGACGTATTTCCTGCGGCGTGCCTGGGCTGCCGATGCCCGGGACGAGTTCAAGCAGATCTTCGAACTGCTCATG
AAGCGCGTGGAGCAGTCCCTGTATTCAACGGTCGCCGACTCCCGCATGACTGGGGCGCAAGGCATACGCGAAGAGATCAT
GGGCCGCTTCGCCGAGCGAATCGCCAAGGACTGTCAAGGCCGCTTCGCCATGCTGGACTTCTTTGAGGTGCGGTTCGACC
TGGCATTCGCCCGATTCCGCAAAACCGTGCTGAGGCAGATTGGTCCGGCCTCGGTTCTTACCGTGCCGCTGTCCACGGAT
GGCGATGAGGGTCAGGACATTTCTCCGGAGGTCGAGGCAGCAGCGGCCGACTTCCTCGGAGGTGACCCTCAAAAAATTGA
CGATCCGGCTTTCCGGTTGGAGTTGGATGCTGCGATTGATGCGTTACCAGATGATCAAAGACGGGTCGTGGGCTTGCTGC
GGCAAGGTTTCCAGATCGACTCAAAGGACTCGAACATCATGACTATCGCCAAGATGCTGAAGTGCGATGAAAGAACCGTA
CGGAATCGCCGCGACCGTGCATACAAGACCCTCAGGTCTGCTCTGCAGGAGGACGCATGA

Upstream 100 bases:

>100_bases
CGTGCCGATCCAGCCGCAGGTGTCCTTGCCGATCCGCATCCGGTGACGGTGGAAGGGCAAACGTATGTACAGAACGGACT
GACGGGAAAGGAGGAGATCG

Downstream 100 bases:

>100_bases
GCACTTCAAAGCCGTTCGCCGCGGACGAGGAATCCGTGCTGATGGCGTTCTCAATGGAGCCCAGCCATGGCCGGGAAACG
CTTGTGCGTTACATCAAAGA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: Response Regulator Receiver Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Chromosome Segregation ATPase

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPEPLKSKDKHGAPFTRPPEIEASLGRLEAVDAAARLQAFAVASRKSSGYVPSEALTYFLRRAWAADARDEFKQIFELLM
KRVEQSLYSTVADSRMTGAQGIREEIMGRFAERIAKDCQGRFAMLDFFEVRFDLAFARFRKTVLRQIGPASVLTVPLSTD
GDEGQDISPEVEAAAADFLGGDPQKIDDPAFRLELDAAIDALPDDQRRVVGLLRQGFQIDSKDSNIMTIAKMLKCDERTV
RNRRDRAYKTLRSALQEDA

Sequences:

>Translated_259_residues
MPEPLKSKDKHGAPFTRPPEIEASLGRLEAVDAAARLQAFAVASRKSSGYVPSEALTYFLRRAWAADARDEFKQIFELLM
KRVEQSLYSTVADSRMTGAQGIREEIMGRFAERIAKDCQGRFAMLDFFEVRFDLAFARFRKTVLRQIGPASVLTVPLSTD
GDEGQDISPEVEAAAADFLGGDPQKIDDPAFRLELDAAIDALPDDQRRVVGLLRQGFQIDSKDSNIMTIAKMLKCDERTV
RNRRDRAYKTLRSALQEDA
>Mature_258_residues
PEPLKSKDKHGAPFTRPPEIEASLGRLEAVDAAARLQAFAVASRKSSGYVPSEALTYFLRRAWAADARDEFKQIFELLMK
RVEQSLYSTVADSRMTGAQGIREEIMGRFAERIAKDCQGRFAMLDFFEVRFDLAFARFRKTVLRQIGPASVLTVPLSTDG
DEGQDISPEVEAAAADFLGGDPQKIDDPAFRLELDAAIDALPDDQRRVVGLLRQGFQIDSKDSNIMTIAKMLKCDERTVR
NRRDRAYKTLRSALQEDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29009; Mature: 28878

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEPLKSKDKHGAPFTRPPEIEASLGRLEAVDAAARLQAFAVASRKSSGYVPSEALTYFL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RRAWAADARDEFKQIFELLMKRVEQSLYSTVADSRMTGAQGIREEIMGRFAERIAKDCQG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RFAMLDFFEVRFDLAFARFRKTVLRQIGPASVLTVPLSTDGDEGQDISPEVEAAAADFLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC
GDPQKIDDPAFRLELDAAIDALPDDQRRVVGLLRQGFQIDSKDSNIMTIAKMLKCDERTV
CCCCCCCCCHHEEEHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
RNRRDRAYKTLRSALQEDA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA