| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610663
Identifier: 121610663
GI number: 121610663
Start: 4131388
End: 4133610
Strand: Direct
Name: 121610663
Synonym: Veis_3739
Alternate gene names: NA
Gene position: 4131388-4133610 (Clockwise)
Preceding gene: 121610662
Following gene: 121610664
Centisome position: 74.22
GC content: 63.88
Gene sequence:
>2223_bases ATGAGCCAAACCAATTTCCTGATCGGTCGTGGCGAACTGCTGACCCATGACATCGTCGGCCCGAGACGCATGCCCGGCAA GGCCGAGGTTTACACCTTCGCGCAGGCGCGGGAACGAATGGTTCCTCAGTTTCGAAGTGCCGCCAAGGCGCTGGACGAAC TGCCTGCTGATGCCTGTCCGGGCGACTTCGCAGTGGCCCGGCTGATGATGAACCCCAGTTTCATCGCTCGTTCCTACTTC CCGACCGGGCTGTTGCGCAGTACGGGGCTGGAGTCCATCGGCAGCCGCACCGTCAAGGTCAAGCCGCAGGCCTGGACCCG CAAGGGGCAGCCGCAGGAGACCACAACGACCGAGCTGTTCGTCGCCGGCAAGCGCCAAGCCTTCCGTAAGCTCTCGCAGT GGACGGAAACCATCGACGCGCAGTCCGACGAGGGCGAAGACCTGACCCACATCGAACAGTTTGCCGCGTTCGCGGCGGCC GAGCGCATCGTGAACCTGGGCGGCCCAAAGGATCGCTTCTTCGAGGTGGGCTTGCATTTGTTGCCGGACGAAGATCCTGG CCTGATCCAGAGGGCCTTCGTGAAGTTTGCCAGGCGGGAGGAGGTCAAGGTCCACACTGAAGTCGACTTCGTCGCAGGCA ACCTGTGGTTTGTGCCGGTCGAGGGCAAGCCGCGCGAAGTCGAGAGGCTGGCCGGCTTCGCCTTCGTCCGGGTGATCCGG CCGGTGCCCAAGCTGCGCGGCATTCGCCCGTTGCAACGCAGCGGCGGCCCCTCGGTGGGGTGCAGCCTTCCCACCGAGCA GGCCCTGTCGTCCGAGCCTCGAGTCGCCATCCTGGACGGCGGCCTCCCAAAGCACCACCCCATCGGTCCCTGGCTGCACT TATACCGCAAGCTCGACGAAGATGCCGCCGATGACCCGGACGGCCCGGAGCACGGTCTGGGCGTGACATCGGCCGTGCTG TTCGGCCCGATCCAGCCCAACGGGATGGCCGGCAGGCCTTTCGCACCGGTGGACCATTTGCGCGTGCTCGACCAAGATTC GAGCGGCGAAGACCCGCTGGAGTTGTATCGCACGCTCGGTCTCATCGAACAGGTTCTGCTGTCGCGATCCTATGAGTTCA TCAACCTGAGCTTGGGGCCGGACCTGGAGGTTGAGGATCAGGAAGTTCATGCTTGGACATCCGTCATCGACGAACTGCTC AGCGACGGCGACACGCTCATGACCGTGGCTGTGGGCAATAACGGAGAACGCGACCGCGAACTTGGTTACAGCCGTGTGCA GGTTCCGTCGGACTGCGTGAATGCGCTCTCGGTCGGCGCAGCCGATGACACGGGCACGGGTTGGGCTCGCGCGCCCTACA GTGCGATCGGGCCAGGCCGCAGCCCCGGTGTCGTCAAGCCGGACCTGATGGCCTTCGGCGGCAACCCGGCGTCCAAATAC TTCCACGTCCTGGCGCCGAACGCGAGGCCGGTGCTGACGCCCCAACTCGGCACCAGCTTTGCGGCGCCGTACCTGCTGCG CAGTGCTATCGGCATCCGTGCAATCCTGGGCGGCAACCTGACGCCTCTCGCCATCAAGGCCTTGCTGGTCCATGCGGCCG ATCCCGGCGAGCATGATCCGATCGAAGTTGGCTGGGGCAAGATTCCCGAGGACACCCTGGACATCATCACCTGCCCGGAT GGCGTGGCCCGGGTGGTCTATCAGGGCGAGCTCAAACCCAGCAAATACCTGCGCGCCAGCTTGCCGCTGCCGAAGGAGGG TCTGACGGGCAATGTTCGCATGAAGGCCACCTTCTGTTACGCATCTCCTACTGATCCGCAGGATGCCGCGGCCTACACCA AGGCCGGTCTCGAAGTTGTCTTCCGTCCCAACGACGAGAAGATCAAGGATGGCAAGAGCAACGCCGACACCAAGGGATTT TTCGACCTGAAGAAGTTCGCCACCGAGCAGGAGCGCCGCTCTGATCAGGGCAAGTGGGAAACCGTGCTGCACGGGGCCAA GACCTTCCGTGGTTCTAGCCTCAAGAACCCCGTATTCGACATTCACTACAACGCCCGCGACGGCGGCGGCCGGGCCACTG GTCCTGAGAAGATCCGCTACGCATTGATCCTCTCGGTCGAAGCCCCGAAGCACGCCGATCTCTACAACGAGATCCTGCGC ACCTATGCCAAGACCCTCGTGCCGATCCAGCCGCAGGTGTCCTTGCCGATCCGCATCCGGTGA
Upstream 100 bases:
>100_bases CCGTCTCCGACATCACCGGGGTGAGCCGGGACACGATCCGCAAGTACACCAACGAGACACCTGCGGCACGAAAGGCCGCG CCCCGGAGAAAGGCTGACGC
Downstream 100 bases:
>100_bases CGGTGGAAGGGCAAACGTATGTACAGAACGGACTGACGGGAAAGGAGGAGATCGATGCCGGAACCGTTGAAGAGCAAAGA CAAACACGGGGCGCCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase S8/S53 Subtilisin Kexin Sedolisin; Peptidase S8 And S; Subtilisin-Like Serine Protease; Proteases; Subtilisin-Like Protease
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MSQTNFLIGRGELLTHDIVGPRRMPGKAEVYTFAQARERMVPQFRSAAKALDELPADACPGDFAVARLMMNPSFIARSYF PTGLLRSTGLESIGSRTVKVKPQAWTRKGQPQETTTTELFVAGKRQAFRKLSQWTETIDAQSDEGEDLTHIEQFAAFAAA ERIVNLGGPKDRFFEVGLHLLPDEDPGLIQRAFVKFARREEVKVHTEVDFVAGNLWFVPVEGKPREVERLAGFAFVRVIR PVPKLRGIRPLQRSGGPSVGCSLPTEQALSSEPRVAILDGGLPKHHPIGPWLHLYRKLDEDAADDPDGPEHGLGVTSAVL FGPIQPNGMAGRPFAPVDHLRVLDQDSSGEDPLELYRTLGLIEQVLLSRSYEFINLSLGPDLEVEDQEVHAWTSVIDELL SDGDTLMTVAVGNNGERDRELGYSRVQVPSDCVNALSVGAADDTGTGWARAPYSAIGPGRSPGVVKPDLMAFGGNPASKY FHVLAPNARPVLTPQLGTSFAAPYLLRSAIGIRAILGGNLTPLAIKALLVHAADPGEHDPIEVGWGKIPEDTLDIITCPD GVARVVYQGELKPSKYLRASLPLPKEGLTGNVRMKATFCYASPTDPQDAAAYTKAGLEVVFRPNDEKIKDGKSNADTKGF FDLKKFATEQERRSDQGKWETVLHGAKTFRGSSLKNPVFDIHYNARDGGGRATGPEKIRYALILSVEAPKHADLYNEILR TYAKTLVPIQPQVSLPIRIR
Sequences:
>Translated_740_residues MSQTNFLIGRGELLTHDIVGPRRMPGKAEVYTFAQARERMVPQFRSAAKALDELPADACPGDFAVARLMMNPSFIARSYF PTGLLRSTGLESIGSRTVKVKPQAWTRKGQPQETTTTELFVAGKRQAFRKLSQWTETIDAQSDEGEDLTHIEQFAAFAAA ERIVNLGGPKDRFFEVGLHLLPDEDPGLIQRAFVKFARREEVKVHTEVDFVAGNLWFVPVEGKPREVERLAGFAFVRVIR PVPKLRGIRPLQRSGGPSVGCSLPTEQALSSEPRVAILDGGLPKHHPIGPWLHLYRKLDEDAADDPDGPEHGLGVTSAVL FGPIQPNGMAGRPFAPVDHLRVLDQDSSGEDPLELYRTLGLIEQVLLSRSYEFINLSLGPDLEVEDQEVHAWTSVIDELL SDGDTLMTVAVGNNGERDRELGYSRVQVPSDCVNALSVGAADDTGTGWARAPYSAIGPGRSPGVVKPDLMAFGGNPASKY FHVLAPNARPVLTPQLGTSFAAPYLLRSAIGIRAILGGNLTPLAIKALLVHAADPGEHDPIEVGWGKIPEDTLDIITCPD GVARVVYQGELKPSKYLRASLPLPKEGLTGNVRMKATFCYASPTDPQDAAAYTKAGLEVVFRPNDEKIKDGKSNADTKGF FDLKKFATEQERRSDQGKWETVLHGAKTFRGSSLKNPVFDIHYNARDGGGRATGPEKIRYALILSVEAPKHADLYNEILR TYAKTLVPIQPQVSLPIRIR >Mature_739_residues SQTNFLIGRGELLTHDIVGPRRMPGKAEVYTFAQARERMVPQFRSAAKALDELPADACPGDFAVARLMMNPSFIARSYFP TGLLRSTGLESIGSRTVKVKPQAWTRKGQPQETTTTELFVAGKRQAFRKLSQWTETIDAQSDEGEDLTHIEQFAAFAAAE RIVNLGGPKDRFFEVGLHLLPDEDPGLIQRAFVKFARREEVKVHTEVDFVAGNLWFVPVEGKPREVERLAGFAFVRVIRP VPKLRGIRPLQRSGGPSVGCSLPTEQALSSEPRVAILDGGLPKHHPIGPWLHLYRKLDEDAADDPDGPEHGLGVTSAVLF GPIQPNGMAGRPFAPVDHLRVLDQDSSGEDPLELYRTLGLIEQVLLSRSYEFINLSLGPDLEVEDQEVHAWTSVIDELLS DGDTLMTVAVGNNGERDRELGYSRVQVPSDCVNALSVGAADDTGTGWARAPYSAIGPGRSPGVVKPDLMAFGGNPASKYF HVLAPNARPVLTPQLGTSFAAPYLLRSAIGIRAILGGNLTPLAIKALLVHAADPGEHDPIEVGWGKIPEDTLDIITCPDG VARVVYQGELKPSKYLRASLPLPKEGLTGNVRMKATFCYASPTDPQDAAAYTKAGLEVVFRPNDEKIKDGKSNADTKGFF DLKKFATEQERRSDQGKWETVLHGAKTFRGSSLKNPVFDIHYNARDGGGRATGPEKIRYALILSVEAPKHADLYNEILRT YAKTLVPIQPQVSLPIRIR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80911; Mature: 80780
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTNFLIGRGELLTHDIVGPRRMPGKAEVYTFAQARERMVPQFRSAAKALDELPADACP CCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GDFAVARLMMNPSFIARSYFPTGLLRSTGLESIGSRTVKVKPQAWTRKGQPQETTTTELF CHHHHHHHHHCHHHHHHHHCCHHHHHHCCHHHHCCCEEEECCHHHCCCCCCCCCCCEEEE VAGKRQAFRKLSQWTETIDAQSDEGEDLTHIEQFAAFAAAERIVNLGGPKDRFFEVGLHL ECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEE LPDEDPGLIQRAFVKFARREEVKVHTEVDFVAGNLWFVPVEGKPREVERLAGFAFVRVIR CCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHH PVPKLRGIRPLQRSGGPSVGCSLPTEQALSSEPRVAILDGGLPKHHPIGPWLHLYRKLDE CCHHHCCCCCHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC DAADDPDGPEHGLGVTSAVLFGPIQPNGMAGRPFAPVDHLRVLDQDSSGEDPLELYRTLG CCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHH LIEQVLLSRSYEFINLSLGPDLEVEDQEVHAWTSVIDELLSDGDTLMTVAVGNNGERDRE HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH LGYSRVQVPSDCVNALSVGAADDTGTGWARAPYSAIGPGRSPGVVKPDLMAFGGNPASKY CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHEECCCHHHCE FHVLAPNARPVLTPQLGTSFAAPYLLRSAIGIRAILGGNLTPLAIKALLVHAADPGEHDP EEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC IEVGWGKIPEDTLDIITCPDGVARVVYQGELKPSKYLRASLPLPKEGLTGNVRMKATFCY EECCCCCCCCCCEEEEECCCHHEEHEEECCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEE ASPTDPQDAAAYTKAGLEVVFRPNDEKIKDGKSNADTKGFFDLKKFATEQERRSDQGKWE CCCCCCHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH TVLHGAKTFRGSSLKNPVFDIHYNARDGGGRATGPEKIRYALILSVEAPKHADLYNEILR HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCHHHHHHHHHH TYAKTLVPIQPQVSLPIRIR HHHHHHCCCCCCCCCCEEEC >Mature Secondary Structure SQTNFLIGRGELLTHDIVGPRRMPGKAEVYTFAQARERMVPQFRSAAKALDELPADACP CCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GDFAVARLMMNPSFIARSYFPTGLLRSTGLESIGSRTVKVKPQAWTRKGQPQETTTTELF CHHHHHHHHHCHHHHHHHHCCHHHHHHCCHHHHCCCEEEECCHHHCCCCCCCCCCCEEEE VAGKRQAFRKLSQWTETIDAQSDEGEDLTHIEQFAAFAAAERIVNLGGPKDRFFEVGLHL ECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEE LPDEDPGLIQRAFVKFARREEVKVHTEVDFVAGNLWFVPVEGKPREVERLAGFAFVRVIR CCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHH PVPKLRGIRPLQRSGGPSVGCSLPTEQALSSEPRVAILDGGLPKHHPIGPWLHLYRKLDE CCHHHCCCCCHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC DAADDPDGPEHGLGVTSAVLFGPIQPNGMAGRPFAPVDHLRVLDQDSSGEDPLELYRTLG CCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHH LIEQVLLSRSYEFINLSLGPDLEVEDQEVHAWTSVIDELLSDGDTLMTVAVGNNGERDRE HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH LGYSRVQVPSDCVNALSVGAADDTGTGWARAPYSAIGPGRSPGVVKPDLMAFGGNPASKY CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHEECCCHHHCE FHVLAPNARPVLTPQLGTSFAAPYLLRSAIGIRAILGGNLTPLAIKALLVHAADPGEHDP EEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC IEVGWGKIPEDTLDIITCPDGVARVVYQGELKPSKYLRASLPLPKEGLTGNVRMKATFCY EECCCCCCCCCCEEEEECCCHHEEHEEECCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEE ASPTDPQDAAAYTKAGLEVVFRPNDEKIKDGKSNADTKGFFDLKKFATEQERRSDQGKWE CCCCCCHHHHHHHHCCEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH TVLHGAKTFRGSSLKNPVFDIHYNARDGGGRATGPEKIRYALILSVEAPKHADLYNEILR HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCHHHHHHHHHH TYAKTLVPIQPQVSLPIRIR HHHHHHCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA