| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610649
Identifier: 121610649
GI number: 121610649
Start: 4116028
End: 4116924
Strand: Direct
Name: 121610649
Synonym: Veis_3723
Alternate gene names: NA
Gene position: 4116028-4116924 (Clockwise)
Preceding gene: 121610648
Following gene: 121610652
Centisome position: 73.94
GC content: 63.88
Gene sequence:
>897_bases ATGGCCAAGCCCGCAACGCTCGACGGCTACAGCGACCAGTACACCGTGGACTGCGAACGTGTCCTCGTGACGCTGCTGCG CGGTCTCGGACCGTGGAAGGATTCGGTCTACCTGGTTGGCGGGCTCACGCCGCGGTATCTCGTCGCCGCACGGCCACCCG CGGTGCCGGCGCACGCCGGCACGCTGGATGTGGACATCGTGATCGATCTGCAAATCCTGGCTGACACCGAGGCCTATCAC ACGCTGGAGGACAACCTCAAGAAGATGGGCTTCGAGCGTGCCGAGAACGAAGCCGGGAAGAAGCTCTCGTGGCGTTGGCA AACCCGCACCGAACACGGCGCTCTGATGGTGCTAGAACTGCTGGCCGACGCACCGGACCTTGCCGGCGGCAAGGTACAGC CGTTGCCGACCGAAGGGACGATCTCGGCCCTGAACATCCCGCACTCGTCGATCGTCTTCGACCTGCACCAAGTCACCGAA ATCCAGGCCGAACTATTGGGCGGCAATGGTGTCGCCACCGAGAAGATCAAGCACGCCAATCTCGTCAGCTTCACCTGCCT GAAGTCCTTCGCGTTCGATCAGCGCTTCGAGCGCAAGGACGCGCACGATCTGATCTATTGCATCGAGCACGCGCCCGAAG GCATGGCCACCGTGGCCGAAGCCTTCCGCAACGAGCGGAGCGGCAAGCACGGTGCCGTCATCGATGCCTCGCTGGCGATC GTGCGCAACCGTTTCGCAGGCGACGAGAAGACCGAGGGCTACCGCAAGGATGGCCCCGTATCGGTCGCCAGGTTCGAGCT GGGCGAAAGCGACGAGCCAGATCTGCGTGAAGCACGGGCACTGCGGCAGCGGCAGGCCTGTGACGTGATAGAGCAACTGC TGGCCCGGATCGGTTGA
Upstream 100 bases:
>100_bases GGCTGGCGAGCCCAATCCAGATCTATCTCGACCTGTTGCGTGGCGAAGGCCGCTCCAAGGAAATGGCCGAGCACTTCCGC AAAGAAAGGATCGGCTTCTG
Downstream 100 bases:
>100_bases GGATCGGCGACATGAGCTTTCCCGCCGACATCAAAGGCTGCATGAAGGACTGCATCCTGTCCCTGTTCTGGCCACGCAAG GACATCGTGGGCTTCTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAKPATLDGYSDQYTVDCERVLVTLLRGLGPWKDSVYLVGGLTPRYLVAARPPAVPAHAGTLDVDIVIDLQILADTEAYH TLEDNLKKMGFERAENEAGKKLSWRWQTRTEHGALMVLELLADAPDLAGGKVQPLPTEGTISALNIPHSSIVFDLHQVTE IQAELLGGNGVATEKIKHANLVSFTCLKSFAFDQRFERKDAHDLIYCIEHAPEGMATVAEAFRNERSGKHGAVIDASLAI VRNRFAGDEKTEGYRKDGPVSVARFELGESDEPDLREARALRQRQACDVIEQLLARIG
Sequences:
>Translated_298_residues MAKPATLDGYSDQYTVDCERVLVTLLRGLGPWKDSVYLVGGLTPRYLVAARPPAVPAHAGTLDVDIVIDLQILADTEAYH TLEDNLKKMGFERAENEAGKKLSWRWQTRTEHGALMVLELLADAPDLAGGKVQPLPTEGTISALNIPHSSIVFDLHQVTE IQAELLGGNGVATEKIKHANLVSFTCLKSFAFDQRFERKDAHDLIYCIEHAPEGMATVAEAFRNERSGKHGAVIDASLAI VRNRFAGDEKTEGYRKDGPVSVARFELGESDEPDLREARALRQRQACDVIEQLLARIG >Mature_297_residues AKPATLDGYSDQYTVDCERVLVTLLRGLGPWKDSVYLVGGLTPRYLVAARPPAVPAHAGTLDVDIVIDLQILADTEAYHT LEDNLKKMGFERAENEAGKKLSWRWQTRTEHGALMVLELLADAPDLAGGKVQPLPTEGTISALNIPHSSIVFDLHQVTEI QAELLGGNGVATEKIKHANLVSFTCLKSFAFDQRFERKDAHDLIYCIEHAPEGMATVAEAFRNERSGKHGAVIDASLAIV RNRFAGDEKTEGYRKDGPVSVARFELGESDEPDLREARALRQRQACDVIEQLLARIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32784; Mature: 32652
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPATLDGYSDQYTVDCERVLVTLLRGLGPWKDSVYLVGGLTPRYLVAARPPAVPAHAG CCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC TLDVDIVIDLQILADTEAYHTLEDNLKKMGFERAENEAGKKLSWRWQTRTEHGALMVLEL CEEEEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHCCCEEEEEEECCCCCCHHHHHHH LADAPDLAGGKVQPLPTEGTISALNIPHSSIVFDLHQVTEIQAELLGGNGVATEKIKHAN HHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC LVSFTCLKSFAFDQRFERKDAHDLIYCIEHAPEGMATVAEAFRNERSGKHGAVIDASLAI HHHHHHHHHHHHHHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHH VRNRFAGDEKTEGYRKDGPVSVARFELGESDEPDLREARALRQRQACDVIEQLLARIG HHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKPATLDGYSDQYTVDCERVLVTLLRGLGPWKDSVYLVGGLTPRYLVAARPPAVPAHAG CCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC TLDVDIVIDLQILADTEAYHTLEDNLKKMGFERAENEAGKKLSWRWQTRTEHGALMVLEL CEEEEEEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHCCCEEEEEEECCCCCCHHHHHHH LADAPDLAGGKVQPLPTEGTISALNIPHSSIVFDLHQVTEIQAELLGGNGVATEKIKHAN HHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC LVSFTCLKSFAFDQRFERKDAHDLIYCIEHAPEGMATVAEAFRNERSGKHGAVIDASLAI HHHHHHHHHHHHHHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHH VRNRFAGDEKTEGYRKDGPVSVARFELGESDEPDLREARALRQRQACDVIEQLLARIG HHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA