Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610644

Identifier: 121610644

GI number: 121610644

Start: 4110769

End: 4111728

Strand: Direct

Name: 121610644

Synonym: Veis_3718

Alternate gene names: NA

Gene position: 4110769-4111728 (Clockwise)

Preceding gene: 121610643

Following gene: 121610645

Centisome position: 73.85

GC content: 55.31

Gene sequence:

>960_bases
GTGAAGAACATCAAGATCACGCTGGCGATGGCAGCAACTGCCGCGATGCTGGCCGCCTGTGGTGGCGGTGGCAGCAGCAA
TGAAGGCCAAAACCCCGGCGTGTCGGGCACACCGCCTGCTGCGGACACCCTGAACCGCACCAACACCCCTGGCGTGTATG
CCGACAGCGCGCGCAAGTATGCGTTCGACGCGCTCAATCAGGTGCGCGGCATCACGGGCGTGGGCTTTCTCAAGCAGAAC
GAGGCGCTGGACAAGGCGGCGCAGGCGCATGCGGATTACGGCAGACTGGCTGGACTGAATCCTGTTGATGTTGAACATAC
CGAGAATCCTGGGTATGCAGGCTTCACAGGCAAAACACCGGACGAGCGTGCTCGGCATTTTGGCTATACGTATGGCGCAT
CCGAAGTATTGTCTGGTGGCGTTAACGACATGCAATCTTTTTGGAGTTTACTTGGAGTGCCGTATCACTCCATCAACATG
CTGGATACTTATGCAGACATTGGAGTGGGTGTTTGGCCGAAGGTGATCCTGGTGATGAATCCTGGAAATTACTTCGCACA
ACTTTTGGATGGATCCTTTGTGGCGGTATATCCATGCAATGACATACAGGTCAACGTGCAGGGGCAGGGATATGAGACGC
CGCAGCCGTCTGTTCTGAATGGCAAGGAAGATTTTGGCTACAGCAGCGTAGCACTCGTTCGCATGGGACAAACTCTCGAA
GTCAGTTCATGGGAACTTCGTGATGCAAGCGGGAATGTGGTTCCAACGACACTGATGACGAAGGCCAACGATGCGAATAA
GATGATTCTCGCAAACCAAGCCAGCTTGATTCCGTTGAACGCATTGCCCCGTACCGTGACCACTTACACCAGCGTCCTCA
AAGGCAAGAACAATGGCGTGCCGTTCGAGAAGACTTGCACTTGGCGCACCGTGGTCGGGGAGACAGTGCCGTCGAACTGA

Upstream 100 bases:

>100_bases
ATTTGACTTCGAACTCTTTCAGCATAATGTGCATTCGAGGGCAGGCCAACGCACCGGCCGCCCTCGACATGACTTCCATT
GATGACTGAAGGAGACCGAT

Downstream 100 bases:

>100_bases
GCCATGCCCCACAAAGCAAAAACCGCCCTCGGGCGGTTTTTTGCAGGGAATGAAATTAAGGATGACCGCAATCACCTATG
GCATCATCGATGGGACCGAG

Product: Allergen V5/Tpx-1 family protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 ; Allergen V5/Tpx-1-Like Protein; SCP-Like Extracellular

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKNIKITLAMAATAAMLAACGGGGSSNEGQNPGVSGTPPAADTLNRTNTPGVYADSARKYAFDALNQVRGITGVGFLKQN
EALDKAAQAHADYGRLAGLNPVDVEHTENPGYAGFTGKTPDERARHFGYTYGASEVLSGGVNDMQSFWSLLGVPYHSINM
LDTYADIGVGVWPKVILVMNPGNYFAQLLDGSFVAVYPCNDIQVNVQGQGYETPQPSVLNGKEDFGYSSVALVRMGQTLE
VSSWELRDASGNVVPTTLMTKANDANKMILANQASLIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVVGETVPSN

Sequences:

>Translated_319_residues
MKNIKITLAMAATAAMLAACGGGGSSNEGQNPGVSGTPPAADTLNRTNTPGVYADSARKYAFDALNQVRGITGVGFLKQN
EALDKAAQAHADYGRLAGLNPVDVEHTENPGYAGFTGKTPDERARHFGYTYGASEVLSGGVNDMQSFWSLLGVPYHSINM
LDTYADIGVGVWPKVILVMNPGNYFAQLLDGSFVAVYPCNDIQVNVQGQGYETPQPSVLNGKEDFGYSSVALVRMGQTLE
VSSWELRDASGNVVPTTLMTKANDANKMILANQASLIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVVGETVPSN
>Mature_319_residues
MKNIKITLAMAATAAMLAACGGGGSSNEGQNPGVSGTPPAADTLNRTNTPGVYADSARKYAFDALNQVRGITGVGFLKQN
EALDKAAQAHADYGRLAGLNPVDVEHTENPGYAGFTGKTPDERARHFGYTYGASEVLSGGVNDMQSFWSLLGVPYHSINM
LDTYADIGVGVWPKVILVMNPGNYFAQLLDGSFVAVYPCNDIQVNVQGQGYETPQPSVLNGKEDFGYSSVALVRMGQTLE
VSSWELRDASGNVVPTTLMTKANDANKMILANQASLIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVVGETVPSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33894; Mature: 33894

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKITLAMAATAAMLAACGGGGSSNEGQNPGVSGTPPAADTLNRTNTPGVYADSARKY
CCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCHHHH
AFDALNQVRGITGVGFLKQNEALDKAAQAHADYGRLAGLNPVDVEHTENPGYAGFTGKTP
HHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCH
DERARHFGYTYGASEVLSGGVNDMQSFWSLLGVPYHSINMLDTYADIGVGVWPKVILVMN
HHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEC
PGNYFAQLLDGSFVAVYPCNDIQVNVQGQGYETPQPSVLNGKEDFGYSSVALVRMGQTLE
CCHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VSSWELRDASGNVVPTTLMTKANDANKMILANQASLIPLNALPRTVTTYTSVLKGKNNGV
CCCEEEECCCCCEEEEEEEECCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCC
PFEKTCTWRTVVGETVPSN
CCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKNIKITLAMAATAAMLAACGGGGSSNEGQNPGVSGTPPAADTLNRTNTPGVYADSARKY
CCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCHHHH
AFDALNQVRGITGVGFLKQNEALDKAAQAHADYGRLAGLNPVDVEHTENPGYAGFTGKTP
HHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCH
DERARHFGYTYGASEVLSGGVNDMQSFWSLLGVPYHSINMLDTYADIGVGVWPKVILVMN
HHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEC
PGNYFAQLLDGSFVAVYPCNDIQVNVQGQGYETPQPSVLNGKEDFGYSSVALVRMGQTLE
CCHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VSSWELRDASGNVVPTTLMTKANDANKMILANQASLIPLNALPRTVTTYTSVLKGKNNGV
CCCEEEECCCCCEEEEEEEECCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCC
PFEKTCTWRTVVGETVPSN
CCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA