Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610642

Identifier: 121610642

GI number: 121610642

Start: 4109015

End: 4109947

Strand: Direct

Name: 121610642

Synonym: Veis_3716

Alternate gene names: NA

Gene position: 4109015-4109947 (Clockwise)

Preceding gene: 121610641

Following gene: 121610643

Centisome position: 73.81

GC content: 54.98

Gene sequence:

>933_bases
GTGAAGAACATCAAGATCACGCTGGTGATGACAGCAACTGCTGCGATGCTGGCCGCCTGTGGTGGCGGTGGTTCAGATAC
GCCTGCGGTGACAGCGGACACCCTGAACCGTACCAACACCCCCGGCGTGTATGCCGACAACGAACGCAAGTACATGTTCG
ATTCGCTCAATCAGGTGCGCGGCATCACGGGCGTGGGCTTTCTCAAACAGAACGAGGCGCTGGACAAGGCTGCCCAGGCG
CATGTGGAATACATCAAGATGAATCCCGGTGAATGGAGTCATACTGAAAAACCCGGCTATGCCGGATTCACTGGAGAAAC
TCCTGCAGACCGTGCCAGACACTTCGGATATGCAGGGTATACAGGTGAATCCTTGTCAGGCGGTATTACTGCCATGGGCG
CCATCAATGGACTGCTTGGAGTGCCCTACCATGCCAGACACTTGCTGGAGGACGATAGCGACCTCGGTACTGGCAGAGTA
TCCAGTGGTGCTCATACCGTGGTTACTGGTACTAATTCATGGAATAGCCTCCAAAAACTCGCCGGCGATCAGATTGCAAT
GTATCCATGCAACAACATTCAAGTGAATGTGCAGGGTCAAGGTAACGAAAGACCAAACCCAGTCGTCTTGAATGGCAAGA
AGGATTTCGGTTACAGCAGCATGGCCATTGTTCGTCGCGGTCAGACCTTGGTGGTTGACTCCTGGGAACTGCGCGATGCG
GCCGGTAATCTGGTTCCGACCGTGGTGATGACGGGGGCCAACGATACGCTCAAGTATTTCTCGAATCACGAGGCCGCACT
GATCCCGTTGAACGCATTGCCCCGTACCGTGACCACTTACACCAGCGTCCTCAAAGGCAAGAACAATGGCGTGCCGTTCG
AGAAGACTTGCACTTGGCGCACCGTGGCCGGTGAGACAGTGCCATCGAACTGA

Upstream 100 bases:

>100_bases
ATTTGACTTCGAACTCTTTCAGCATAATGTGCATTCGAGGGCAGGCCAACGCACCGGCCGCCCTCGACATGACTTCCATT
GATGACTGAAGGAGACCGAT

Downstream 100 bases:

>100_bases
GCCATGCCCCACAAAGCAAAAACCGCCCTCAGGCGGTTTTTTTGTGCGCTTGCCCATCCTGAAAGACGAGGTTTGACGCG
CCTTTCGATCAAGGCCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1 ; Allergen V5/Tpx-1-Like Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQA
HVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGYTGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRV
SSGAHTVVTGTNSWNSLQKLAGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA
AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGETVPSN

Sequences:

>Translated_310_residues
MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQA
HVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGYTGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRV
SSGAHTVVTGTNSWNSLQKLAGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA
AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGETVPSN
>Mature_310_residues
MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQA
HVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGYTGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRV
SSGAHTVVTGTNSWNSLQKLAGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA
AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGETVPSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33059; Mature: 33059

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVR
CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEHHCCCCCCCCCEEECCCCHHHHHHHHHHC
GITGVGFLKQNEALDKAAQAHVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGY
CCCCCCEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
TGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRVSSGAHTVVTGTNSWNSLQKL
CCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
AGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA
CCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCHHHHH
AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWR
CCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE
TVAGETVPSN
EECCCCCCCC
>Mature Secondary Structure
MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVR
CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEHHCCCCCCCCCEEECCCCHHHHHHHHHHC
GITGVGFLKQNEALDKAAQAHVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGY
CCCCCCEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
TGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRVSSGAHTVVTGTNSWNSLQKL
CCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH
AGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA
CCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCHHHHH
AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWR
CCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE
TVAGETVPSN
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA