| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610642
Identifier: 121610642
GI number: 121610642
Start: 4109015
End: 4109947
Strand: Direct
Name: 121610642
Synonym: Veis_3716
Alternate gene names: NA
Gene position: 4109015-4109947 (Clockwise)
Preceding gene: 121610641
Following gene: 121610643
Centisome position: 73.81
GC content: 54.98
Gene sequence:
>933_bases GTGAAGAACATCAAGATCACGCTGGTGATGACAGCAACTGCTGCGATGCTGGCCGCCTGTGGTGGCGGTGGTTCAGATAC GCCTGCGGTGACAGCGGACACCCTGAACCGTACCAACACCCCCGGCGTGTATGCCGACAACGAACGCAAGTACATGTTCG ATTCGCTCAATCAGGTGCGCGGCATCACGGGCGTGGGCTTTCTCAAACAGAACGAGGCGCTGGACAAGGCTGCCCAGGCG CATGTGGAATACATCAAGATGAATCCCGGTGAATGGAGTCATACTGAAAAACCCGGCTATGCCGGATTCACTGGAGAAAC TCCTGCAGACCGTGCCAGACACTTCGGATATGCAGGGTATACAGGTGAATCCTTGTCAGGCGGTATTACTGCCATGGGCG CCATCAATGGACTGCTTGGAGTGCCCTACCATGCCAGACACTTGCTGGAGGACGATAGCGACCTCGGTACTGGCAGAGTA TCCAGTGGTGCTCATACCGTGGTTACTGGTACTAATTCATGGAATAGCCTCCAAAAACTCGCCGGCGATCAGATTGCAAT GTATCCATGCAACAACATTCAAGTGAATGTGCAGGGTCAAGGTAACGAAAGACCAAACCCAGTCGTCTTGAATGGCAAGA AGGATTTCGGTTACAGCAGCATGGCCATTGTTCGTCGCGGTCAGACCTTGGTGGTTGACTCCTGGGAACTGCGCGATGCG GCCGGTAATCTGGTTCCGACCGTGGTGATGACGGGGGCCAACGATACGCTCAAGTATTTCTCGAATCACGAGGCCGCACT GATCCCGTTGAACGCATTGCCCCGTACCGTGACCACTTACACCAGCGTCCTCAAAGGCAAGAACAATGGCGTGCCGTTCG AGAAGACTTGCACTTGGCGCACCGTGGCCGGTGAGACAGTGCCATCGAACTGA
Upstream 100 bases:
>100_bases ATTTGACTTCGAACTCTTTCAGCATAATGTGCATTCGAGGGCAGGCCAACGCACCGGCCGCCCTCGACATGACTTCCATT GATGACTGAAGGAGACCGAT
Downstream 100 bases:
>100_bases GCCATGCCCCACAAAGCAAAAACCGCCCTCAGGCGGTTTTTTTGTGCGCTTGCCCATCCTGAAAGACGAGGTTTGACGCG CCTTTCGATCAAGGCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1 ; Allergen V5/Tpx-1-Like Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQA HVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGYTGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRV SSGAHTVVTGTNSWNSLQKLAGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGETVPSN
Sequences:
>Translated_310_residues MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQA HVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGYTGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRV SSGAHTVVTGTNSWNSLQKLAGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGETVPSN >Mature_310_residues MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQA HVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGYTGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRV SSGAHTVVTGTNSWNSLQKLAGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGETVPSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33059; Mature: 33059
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVR CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEHHCCCCCCCCCEEECCCCHHHHHHHHHHC GITGVGFLKQNEALDKAAQAHVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGY CCCCCCEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC TGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRVSSGAHTVVTGTNSWNSLQKL CCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH AGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA CCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCHHHHH AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWR CCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE TVAGETVPSN EECCCCCCCC >Mature Secondary Structure MKNIKITLVMTATAAMLAACGGGGSDTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVR CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEHHCCCCCCCCCEEECCCCHHHHHHHHHHC GITGVGFLKQNEALDKAAQAHVEYIKMNPGEWSHTEKPGYAGFTGETPADRARHFGYAGY CCCCCCEEECCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC TGESLSGGITAMGAINGLLGVPYHARHLLEDDSDLGTGRVSSGAHTVVTGTNSWNSLQKL CCCCCCCCEEEHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHH AGDQIAMYPCNNIQVNVQGQGNERPNPVVLNGKKDFGYSSMAIVRRGQTLVVDSWELRDA CCCEEEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCHHHHH AGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWR CCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE TVAGETVPSN EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA