| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610640
Identifier: 121610640
GI number: 121610640
Start: 4107794
End: 4108411
Strand: Direct
Name: 121610640
Synonym: Veis_3714
Alternate gene names: NA
Gene position: 4107794-4108411 (Clockwise)
Preceding gene: 121610618
Following gene: 121610641
Centisome position: 73.79
GC content: 58.25
Gene sequence:
>618_bases ATGAGTAAAAGGTCTAATGAATCCGAGGCATTCGGAACCAATCAAATTCTCCGGGCGTTCCGGCGCACCTATCCCGAATC CCGGGTGCTGCAGAATGTCATCCTGCCGCTGGATAACTTTGGCGCCTGTCCCACGGCCGAGTTCGACGTGATCGTGGTCT GCATGGCCGGTGTGTATCTCTTCGAGATCAAGGGCTATGATGAAGGCCGGATCGTGATCGACAAAGGCCCCGATGGCATG CAGCTTTGGAAGATCAACAAAATCAGCGGCCCGGTCGATATTCCCAACCCGATAGCCCAAGGTGGCCGCAAGATCCGCTA CCTGCGCCAGTCGATCCCCAACTGCCAGATTCGCGGCTTCGTATATTTCACCAGCGAGCGCATCACCATCCCCGCCGACA TCTCTGCCGACGTGGTGACTACGGCCGACCTGAGCTACCTGCCCCGTGTGCTGCGCTCCGATGCCAAGCGCCGCGACAGG CTGCTCACCGTCACAACGGTCAACGACATTGCCGATTCCATCCTGATGCTCGCCGAGGGCCACACCATGGAAGAACACAT TCAGAACTGCCTTGCGACACACAAAAAGCCCAGGACCGAAGGCCACGCCATCCACTGA
Upstream 100 bases:
>100_bases ATTCGATGAGTATCCTGATTGTCTCGCCTCGCAGCCGCCGCCATGAAGGAATGGAACGTGTATCTGAACGGCCGCTGCGT TGCCACCGTCAACGAAAATC
Downstream 100 bases:
>100_bases GGTCGGTGCGGTCTTGTTCCGCCTCTGGCGTCCAGACGACGATCACGCCTGGCCTGCCGCTGCCTGGTTGCGCTTGGCAG CGAACGCGGCTTGAACTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSKRSNESEAFGTNQILRAFRRTYPESRVLQNVILPLDNFGACPTAEFDVIVVCMAGVYLFEIKGYDEGRIVIDKGPDGM QLWKINKISGPVDIPNPIAQGGRKIRYLRQSIPNCQIRGFVYFTSERITIPADISADVVTTADLSYLPRVLRSDAKRRDR LLTVTTVNDIADSILMLAEGHTMEEHIQNCLATHKKPRTEGHAIH
Sequences:
>Translated_205_residues MSKRSNESEAFGTNQILRAFRRTYPESRVLQNVILPLDNFGACPTAEFDVIVVCMAGVYLFEIKGYDEGRIVIDKGPDGM QLWKINKISGPVDIPNPIAQGGRKIRYLRQSIPNCQIRGFVYFTSERITIPADISADVVTTADLSYLPRVLRSDAKRRDR LLTVTTVNDIADSILMLAEGHTMEEHIQNCLATHKKPRTEGHAIH >Mature_204_residues SKRSNESEAFGTNQILRAFRRTYPESRVLQNVILPLDNFGACPTAEFDVIVVCMAGVYLFEIKGYDEGRIVIDKGPDGMQ LWKINKISGPVDIPNPIAQGGRKIRYLRQSIPNCQIRGFVYFTSERITIPADISADVVTTADLSYLPRVLRSDAKRRDRL LTVTTVNDIADSILMLAEGHTMEEHIQNCLATHKKPRTEGHAIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23043; Mature: 22912
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRSNESEAFGTNQILRAFRRTYPESRVLQNVILPLDNFGACPTAEFDVIVVCMAGVYL CCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCEEE FEIKGYDEGRIVIDKGPDGMQLWKINKISGPVDIPNPIAQGGRKIRYLRQSIPNCQIRGF EEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHCCHHHHHHHHCCCCCEEEEE VYFTSERITIPADISADVVTTADLSYLPRVLRSDAKRRDRLLTVTTVNDIADSILMLAEG EEEECCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCC HTMEEHIQNCLATHKKPRTEGHAIH CCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SKRSNESEAFGTNQILRAFRRTYPESRVLQNVILPLDNFGACPTAEFDVIVVCMAGVYL CCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCEEE FEIKGYDEGRIVIDKGPDGMQLWKINKISGPVDIPNPIAQGGRKIRYLRQSIPNCQIRGF EEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHCCHHHHHHHHCCCCCEEEEE VYFTSERITIPADISADVVTTADLSYLPRVLRSDAKRRDRLLTVTTVNDIADSILMLAEG EEEECCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCC HTMEEHIQNCLATHKKPRTEGHAIH CCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA