Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610600

Identifier: 121610600

GI number: 121610600

Start: 4060386

End: 4061363

Strand: Direct

Name: 121610600

Synonym: Veis_3673

Alternate gene names: NA

Gene position: 4060386-4061363 (Clockwise)

Preceding gene: 121610597

Following gene: 121610601

Centisome position: 72.94

GC content: 56.65

Gene sequence:

>978_bases
GTGAAGAACATCAAGATCACGCTGGTGATGACAGCAACTGCTGCGATGCTGGCCGCCTGTGGTGGCGGTGGTTCAGATAC
GCCTGCGGTGGTTACGCCTGCTCCAGATACGCCTGCGGTGGTTACGCCTGCGGTGACAGCGGACACCCTGAACCGTACCA
ACACCCCCGGCGTGTATGCCGACAACGAACGCAAGTACATGTTCGACATGCTCAATCAGGTGCGCGGCATCACGGGCGTG
GGCTTTCTCAAGCAGAACGAGGCGCTGGACAAGGCGGCGCAGGCGCACGCGGAATATCGCTGGATGAACCCCGGAGAATC
GGGTCATACTGAAAAAATCGACTACGCTGGATTCACTGGAGAAACTCCTGCAGACCGTGCCAGACACTTCGGATATGCAG
GGTATGCATCTGAATCCGTGGTTGGCAGCATTACTGCCATGGGCGCCATCAATAGACTGCTTGGAGGGCCCTACCATGCC
AGACACTTGCTTTGGGATGATAACGACCTCGGCACTGGCAGGGTATCCAGTGGCTTACATACCGTGGTTACTGGCACTAA
TTCATGGAATGATCGCCAAAAACTCGCCGGCGATCAGATTGCAATGTATCCATGCAACAACATTCAAGTGAATGTACAGG
GCCAAGGCTACGAGACGCCAACCCCAGCCGTCTTGAATGGCAAGGATGATTTCGGTTACAGCAGCATGGCCATTGTTCGT
CGCGGTCAGACCCTGGTGGTTGACGCCTGGGAACTGCGCGATGCGGCCGGTAATCTGGTTCCGACCGTGGTGATGACGGG
GGCCAACGATACGCTCAAGTATTTCTCGAATCACGAGGCCGCACTGATCCCGCTGAACGCATTGCCCCGTACCGTGACCA
CTTACACCAGCGTCCTCAAAGGAAAGAACAATGGCGTGCCGTTCGAGAAGACTTGCACTTGGCGCACTGTGGCCGGTGAG
ACAGTGCCGTCGAACTGA

Upstream 100 bases:

>100_bases
ATTTGATTTTCAATTTTTTCAGCATAATGTGTATTCGAGGGCAGGCCAACCCACCGGCCGCCCTCGACATGACTTCCATT
GATAACTGAAGGAGACCGAT

Downstream 100 bases:

>100_bases
GCCATACCCCACAAAGCAAAAACCGCCCTCAGGCGGTTTTTTTGTGCGCTTGCCCATCCTGAAGGCCGAGGTTTGACGCG
CCTTTCGATCAAGGCCCGAT

Product: Allergen V5/Tpx-1 family protein

Products: NA

Alternate protein names: SCP-Like Extracellular; Allergen V5/Tpx-1 ; Allergen V5/Tpx-1-Like Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKNIKITLVMTATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYADNERKYMFDMLNQVRGITGV
GFLKQNEALDKAAQAHAEYRWMNPGESGHTEKIDYAGFTGETPADRARHFGYAGYASESVVGSITAMGAINRLLGGPYHA
RHLLWDDNDLGTGRVSSGLHTVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKDDFGYSSMAIVR
RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGE
TVPSN

Sequences:

>Translated_325_residues
MKNIKITLVMTATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYADNERKYMFDMLNQVRGITGV
GFLKQNEALDKAAQAHAEYRWMNPGESGHTEKIDYAGFTGETPADRARHFGYAGYASESVVGSITAMGAINRLLGGPYHA
RHLLWDDNDLGTGRVSSGLHTVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKDDFGYSSMAIVR
RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGE
TVPSN
>Mature_325_residues
MKNIKITLVMTATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYADNERKYMFDMLNQVRGITGV
GFLKQNEALDKAAQAHAEYRWMNPGESGHTEKIDYAGFTGETPADRARHFGYAGYASESVVGSITAMGAINRLLGGPYHA
RHLLWDDNDLGTGRVSSGLHTVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKDDFGYSSMAIVR
RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGE
TVPSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34743; Mature: 34743

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKITLVMTATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYA
CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEECCCCCCCEEECCCCHHHCCCCCCCCEEE
DNERKYMFDMLNQVRGITGVGFLKQNEALDKAAQAHAEYRWMNPGESGHTEKIDYAGFTG
CCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCCC
ETPADRARHFGYAGYASESVVGSITAMGAINRLLGGPYHARHLLWDDNDLGTGRVSSGLH
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCE
TVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKDDFGYSSMAIVR
EEEECCCCCCHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEE
RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLK
CCCEEEEEHHHHHHHCCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
GKNNGVPFEKTCTWRTVAGETVPSN
CCCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MKNIKITLVMTATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYA
CCCEEEEEEEEHHHHHHHHCCCCCCCCCEEEECCCCCCCEEECCCCHHHCCCCCCCCEEE
DNERKYMFDMLNQVRGITGVGFLKQNEALDKAAQAHAEYRWMNPGESGHTEKIDYAGFTG
CCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCCC
ETPADRARHFGYAGYASESVVGSITAMGAINRLLGGPYHARHLLWDDNDLGTGRVSSGLH
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCCCE
TVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKDDFGYSSMAIVR
EEEECCCCCCHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEE
RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLK
CCCEEEEEHHHHHHHCCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
GKNNGVPFEKTCTWRTVAGETVPSN
CCCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA