| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610580
Identifier: 121610580
GI number: 121610580
Start: 4040382
End: 4040897
Strand: Direct
Name: 121610580
Synonym: Veis_3653
Alternate gene names: NA
Gene position: 4040382-4040897 (Clockwise)
Preceding gene: 121610579
Following gene: 121610589
Centisome position: 72.58
GC content: 60.08
Gene sequence:
>516_bases ATGTCCCCCGGGCCACTTCGCGCCAGAAGGTGGATTTGCCCATGCTCAGCAGCGCTGCGGCCTCTGCGGCCGGGATCAGG ATTTTTTCGATGCTGCTCATGCTCTGCCTCCTGTGGCGCTGATGCTTGCCCGGTAGCTGATTTGAATGCGGGTGATGATG GTCTCCGGTGTGCAACCTCGGTGGGTGGCGCAGAACATCGTGATGAATTCGGCGGGGGTGAGGTGCGGGAATCCTTCGCG CTGGCATTCCCTCCTCCCGTATTCCTGCTCGTCTGTCATGCGGCGCAGTGGCTCTTGGCGCGTGGCGACGACGGTCACGG GGGTGCCTATCTTTTCGATTTTCTCGCCCGCACCAAGCCCCATGTTCTTGATGACTGGCTGCAAAACATCCCCGGGTTTC AGGCGCAACCACCCCAGGCGGCGTGTCACGTCCTTGGTTTGATTCCTCACCTGTTCCGTGGTCAGGGCAAAGCTGATGTT TCTCACGCTGCTTTCCTGCGTTCCTGTGTGATGTAG
Upstream 100 bases:
>100_bases GCTCATGCAGTGGTGGGCTCAGTGGCTTGCTGCTGCACAAACTTCTTCAGATCCTCGACACGCCAGCGCGTGAGTCCGCC GATTTTGATCGGTTCGGGCA
Downstream 100 bases:
>100_bases TTCGCTTGGACCAACAACCGTGCCACCGGTGGGCAGACGCTGTTGCCGCACATGCGTATTTGTGCGGTCTTGGTCAGCGG TTTGCCATCGGCACGTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSPGPLRARRWICPCSAALRPLRPGSGFFRCCSCSASCGADACPVADLNAGDDGLRCATSVGGAEHRDEFGGGEVRESFA LAFPPPVFLLVCHAAQWLLARGDDGHGGAYLFDFLARTKPHVLDDWLQNIPGFQAQPPQAACHVLGLIPHLFRGQGKADV SHAAFLRSCVM
Sequences:
>Translated_171_residues MSPGPLRARRWICPCSAALRPLRPGSGFFRCCSCSASCGADACPVADLNAGDDGLRCATSVGGAEHRDEFGGGEVRESFA LAFPPPVFLLVCHAAQWLLARGDDGHGGAYLFDFLARTKPHVLDDWLQNIPGFQAQPPQAACHVLGLIPHLFRGQGKADV SHAAFLRSCVM >Mature_170_residues SPGPLRARRWICPCSAALRPLRPGSGFFRCCSCSASCGADACPVADLNAGDDGLRCATSVGGAEHRDEFGGGEVRESFAL AFPPPVFLLVCHAAQWLLARGDDGHGGAYLFDFLARTKPHVLDDWLQNIPGFQAQPPQAACHVLGLIPHLFRGQGKADVS HAAFLRSCVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18202; Mature: 18071
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGPLRARRWICPCSAALRPLRPGSGFFRCCSCSASCGADACPVADLNAGDDGLRCATS CCCCCCCHHHCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH VGGAEHRDEFGGGEVRESFALAFPPPVFLLVCHAAQWLLARGDDGHGGAYLFDFLARTKP CCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC HVLDDWLQNIPGFQAQPPQAACHVLGLIPHLFRGQGKADVSHAAFLRSCVM HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SPGPLRARRWICPCSAALRPLRPGSGFFRCCSCSASCGADACPVADLNAGDDGLRCATS CCCCCCHHHCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH VGGAEHRDEFGGGEVRESFALAFPPPVFLLVCHAAQWLLARGDDGHGGAYLFDFLARTKP CCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC HVLDDWLQNIPGFQAQPPQAACHVLGLIPHLFRGQGKADVSHAAFLRSCVM HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA