| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610558
Identifier: 121610558
GI number: 121610558
Start: 4014883
End: 4017738
Strand: Direct
Name: 121610558
Synonym: Veis_3631
Alternate gene names: NA
Gene position: 4014883-4017738 (Clockwise)
Preceding gene: 121610556
Following gene: 121610559
Centisome position: 72.12
GC content: 70.45
Gene sequence:
>2856_bases ATGGGCGCTCCCCGGTGTCGCCCTGACCAGGGATCGCAGCGTCAGCCGGTCTGGCACCATGGCTTGCCCTCAGGCAATGA GTTCGGGGGCGCCCTCGTCCATCCACTGGATACCATGTTTTCATTTTTTCCCCGCAGCAAAATGTCCGAAGCACCTGAAG TGAATCCGGCCCCGGCCAAAACCCACGAGCCGCAGCCACTCGATGCGCTGACCGGTGGCGCCTTTTCCGCCGCCACCTCC GGCGAGCGCGCCGCCCGCATTCGCGACTGGCTGCTCACCGAGCCCGCGCCGGAACAATTGCAGGAAGTCTTCAAGGAACT GAGCCGGCGTGACAAGGGCGCCGCCCGTGCAGTGCGCGAGCGCCTGGACGAAATCCGCCGCGCCAAGGGGCAGCAAGCCA TCGCTGCCGAATGGGCGGAAAAGGCCCAGGCCCTGCTGGCGACCCCCAAGCTCAACATTGCCGATGCGATGGCCTGGCAG CGCGATGCCGCCAAGGCCGGCGCCCCGCTGTCGCGCGAGCCGCTGTCGCTGCTCAAGATACAGGTGGCGCAGCGGGTGCA GGTCATCGAAGACCTGCAGCACCGCGTGCAGGTGCAGCGCGAAGCGGCGGTGCTGCTGGCCCAGCGCATCGAGGTGCTGT CCACCAAGCCCTGGCGCGATGCGCTGGCCGCGCTCGACGCGCTGCGCGCCGATGTCGCCCACTGGCAGGAGCAGGCCCTG CAACTGAGCAGCGATGCCAGTTGGGCCAGCGTGGACCTGCGCTTTCCGCCGCTGCTGGAGGCATCGCGCAGCCAACTGCT GGTGGTGTGGGAGGCGTTCCAGCCGGCGCTGGCCCAGGCCGCTGCGGCCGCCGAAGACGCCGCTGCGCCGCTGCCGCCAG TGCCCGTGTGGGCCGACGAGTTGCGCGCCGCGCGCGGCTTGCTCGCCGAGGCCGCTGCCAAACCCGCCCGCGCCGCCCGG CCCAAGCCCGACCCCGAAGTGCTGGCGCAAGCGACCGAACTGGTGCGCGCAGCCCTGGCGACGCTGGAAAAGGCAACCGC CGAAGGCCATGGCAAGGCCAGCGCCGGCGCCGCAGCGGCGCTGCGCGCCGTGCTCAAGGCGCAGGGCAAGCATATCGATG ACAAACTGGAGCAGCAGGTGCATGCCGCGCTGGTGGCAGCCGGCGAACTCGAAGGCTGGCAGCGCTGGAGCACCGACCAA GTGCGCGAAGACCTGGTGGCCAAGGCCGAGGCGCTGCTCACCCGCCCCGAAGGCCAGACCCTGGGCGGACGCAAGATGCA GGAAACCCTGCGCCATCTGCGCGACCAATGGAAACAGGCCGACCAAGGCGGCGCGCCGAACCACGCGCTGTGGAAGCGGT TCGACGAGGCTTGCAACGCCGCGCACAAGGTGGTCGAGCTCTGGCTGGACAATATCCGCAGCGAAGCCGCCGAGCACAAG GCGCAGCGCCTGGCCCTGATCGAAGAGCTCAAGGACTGGGCGCAGCAGCCGGCCGCCTCGGGGGATTGGAAAGCCGTCCA CCGCGCGCTGCAGCAGTTTGGCGAGCGCTGGCGCGAAGGCGGCCATGTGGGCGAGAAGATCTTCGCCGAGTTGCAGCCGC TGTGGAAGCAGGCCCTGGCCCTGGCGGCCGCGCCGTTGGAAGCGGCGCAAAAAGAGAGCCTGGCCCGGCGCCAGGCGATG ATCGAAGAGGCCAACGCGCTGGGCGCCGCAGCCACGCTGCGCATCGACGCCGTCAAGGCCCTGCAGCAGCGCTGGCAGGC CGAAGCGCAGACCGTGCCGCTGGAGCGCAAGCATGAGCAAAAGCTCTGGGAGGCTTTCCGCAAACCGTTGGACGAAGCCT TCCAGCGCAAGTCGACCGAGCGCGAGCGCGCCGTCTCCGAACTGAGCGCGCGCGACCGCATGGTCCTCGACGCGGCCAAT GCCCTGCAAGCGGCCAATGCCAGCGCTGACGCGCAGCAGATTCGCGCTGCGATGCAGGCGCTCGAAGCCGCCTTGCGCGG CCAGGCCCAGGCGGCGCAAGTGCTGGCCTCGGCGCCCAAGGATGCACAAGATCAGGTACAGGTACAGGTACAGGTGCAGG TGCAGGAAGAATCTGCACAGGATGCGACGAAAAGCGTAGCCCATCAGACACCGGAAGAAGGGGCTGACCCGGCCAGTGCG GCGGCGGCGCCTGCCGCCGCGCCCAAGCCTGCGCCACGCCCGGTGGTGGCCGTGCGTGGCGATGACCGCCCCGGCATGAA GAAGGACATGCTGCCCGCCCCGGGCCGGGGTGGGCGTCCCGGCGAGCGCCGCGCCGACCGGCCGGGAGAGCGCGACCGCA ATCCGCGTGCCGATGGCCGCAGGGGCGAGCGCAGCGAGCGTGCTGGCCACGGCGCCGACCGCCCGCTGCCCGAAGAGCGC GGTCCGCGCCTGGGCGACACCGCTTTCCGCGCCCAGCGCGACGCGATGGAGCAGGCCCAACTGGCGCTGAAGAAACTGGC CGCGTTGGCCCATGGCGAGGCGCTGACCCAGTTGCTCACGGCCTGGCAACAGCGCGACGCAACCCAGGTGCCCGGCACGC AGGAGCTTGGCGTGCCGGCCGCGATGCGCAGCGCCTGGACGCAAGCGCTGTCAGCGCCACCCCGGGGCGATGCGTCCGAA GCGCTGCTGCGCCTGGAGATAGCGGCACAAACGCCCACCCCCGCCGAGCACATCGACGCGCGCCGGATGTTGCAACTGCA ATTGCTCACGCGCCGCAACGACCCGGGCCCCGCCCAGACCTGGGGCCAGGACACGGCCCTGGTGCTGGCCAGTGCCAACG ACGCCGCCAACACCCACCGGCTGCAACGGGCGTTGAAGGCATTGCTGCGCAAGTAG
Upstream 100 bases:
>100_bases CGGGCTTTCTTCGGTTTTTCGCAGGCTCGATGCCCTGCTCCGACATTCGGGCCGATGGTTGGGCGCGGTCATCGATCGCG GTCATACGCGGTTATAGATA
Downstream 100 bases:
>100_bases CTGCCGGCGGCCGCCCCGGCCGGACTTGCGGCAAGGCCGGGTTCATGGCAGGTTCATGGAACAGGGCCTCGGCGCGGTCG GCGCGCTGTGCACCCCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 951; Mature: 950
Protein sequence:
>951_residues MGAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAKTHEPQPLDALTGGAFSAATS GERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRERLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQ RDAAKAGAPLSREPLSLLKIQVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADELRAARGLLAEAAAKPARAAR PKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAALRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQ VREDLVAKAEALLTRPEGQTLGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALALAAAPLEAAQKESLARRQAM IEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQKLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAAN ALQAANASADAQQIRAAMQALEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGRRGERSERAGHGADRPLPEER GPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLTAWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASE ALLRLEIAAQTPTPAEHIDARRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK
Sequences:
>Translated_951_residues MGAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAKTHEPQPLDALTGGAFSAATS GERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRERLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQ RDAAKAGAPLSREPLSLLKIQVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADELRAARGLLAEAAAKPARAAR PKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAALRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQ VREDLVAKAEALLTRPEGQTLGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALALAAAPLEAAQKESLARRQAM IEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQKLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAAN ALQAANASADAQQIRAAMQALEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGRRGERSERAGHGADRPLPEER GPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLTAWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASE ALLRLEIAAQTPTPAEHIDARRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK >Mature_950_residues GAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAKTHEPQPLDALTGGAFSAATSG ERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRERLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQR DAAKAGAPLSREPLSLLKIQVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQALQ LSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADELRAARGLLAEAAAKPARAARP KPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAALRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQV REDLVAKAEALLTRPEGQTLGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHKA QRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALALAAAPLEAAQKESLARRQAMI EEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQKLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAANA LQAANASADAQQIRAAMQALEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASAA AAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGRRGERSERAGHGADRPLPEERG PRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLTAWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASEA LLRLEIAAQTPTPAEHIDARRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103435; Mature: 103304
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAK CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC THEPQPLDALTGGAFSAATSGERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRE CCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH RLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQRDAAKAGAPLSREPLSLLKI HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH QVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADE HHCCCCCEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LRAARGLLAEAAAKPARAARPKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAA HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQVREDLVAKAEALLTRPEGQT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC LGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAAAPLEAAQKESLARRQAMIEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAANALQAANASADAQQIRAAMQA HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA HHHHHHCHHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHH AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGR HCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGERSERAGHGADRPLPEERGPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLT CCCHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASEALLRLEIAAQTPTPAEHIDA HHHHCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH RRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure GAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAK CCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC THEPQPLDALTGGAFSAATSGERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRE CCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH RLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQRDAAKAGAPLSREPLSLLKI HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH QVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADE HHCCCCCEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LRAARGLLAEAAAKPARAARPKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAA HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQVREDLVAKAEALLTRPEGQT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC LGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAAAPLEAAQKESLARRQAMIEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAANALQAANASADAQQIRAAMQA HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA HHHHHHCHHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHH AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGR HCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGERSERAGHGADRPLPEERGPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLT CCCHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASEALLRLEIAAQTPTPAEHIDA HHHHCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH RRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA