| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610511
Identifier: 121610511
GI number: 121610511
Start: 3960445
End: 3960903
Strand: Direct
Name: 121610511
Synonym: Veis_3582
Alternate gene names: NA
Gene position: 3960445-3960903 (Clockwise)
Preceding gene: 121610510
Following gene: 121610512
Centisome position: 71.14
GC content: 59.69
Gene sequence:
>459_bases ATGGCCGCAGTGATGGAAAAGACAGTTCTGATCCACGGCCGCAGCCCCGACGAGGTACTCGACTTCTGCTTGGACGGCGC CAACTTCCCGCTGATCTTCCCAGAGCCGATCCGCCCGATCGGCAAGGTCGACCCAACTCAGTTGAAGATCACTGTCGGCC GCGAGTTCGAATTCTTGCACTGGATGCTGTATTGCATCCCGTGCAAGTGGCGGGTACGCATAGCGCAGGTGCACCCCGGC ACTGCCTTCGTCGATCAGATGCTGCGCGGCCCAATGAAGCGTTTGCGCCATGAGCACATCGTGAGACCAGATCCTTGCGG CACGCTGTACACCGACCTCGTCAGCTACGAGGCCTACGGCGGCCGACTGGTTGAGAAGCTGTTCGTGAATCGATACATGA ACCGGCTGTTCGAGGCACGCCACCGCAACATGCGCCGCTTGTTGGAGAACATCCCATGA
Upstream 100 bases:
>100_bases GCCTGCGCAGCTTCGACAAGGCGCTCGAGCCAGAACACTGGGCGCGCTACATCGCCCAATTCAGCAACCAGAGCACAGCA GTCGAGCAGGAGATCGCGTG
Downstream 100 bases:
>100_bases TCGACGTTCTTCCCGGCACCGACCGCCGCCCGACCGACCTTTACATCGACCTGCCTTTCCGGCTCTATCGTCACGATCCG CTCTGGGTGCCGCCACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MAAVMEKTVLIHGRSPDEVLDFCLDGANFPLIFPEPIRPIGKVDPTQLKITVGREFEFLHWMLYCIPCKWRVRIAQVHPG TAFVDQMLRGPMKRLRHEHIVRPDPCGTLYTDLVSYEAYGGRLVEKLFVNRYMNRLFEARHRNMRRLLENIP
Sequences:
>Translated_152_residues MAAVMEKTVLIHGRSPDEVLDFCLDGANFPLIFPEPIRPIGKVDPTQLKITVGREFEFLHWMLYCIPCKWRVRIAQVHPG TAFVDQMLRGPMKRLRHEHIVRPDPCGTLYTDLVSYEAYGGRLVEKLFVNRYMNRLFEARHRNMRRLLENIP >Mature_151_residues AAVMEKTVLIHGRSPDEVLDFCLDGANFPLIFPEPIRPIGKVDPTQLKITVGREFEFLHWMLYCIPCKWRVRIAQVHPGT AFVDQMLRGPMKRLRHEHIVRPDPCGTLYTDLVSYEAYGGRLVEKLFVNRYMNRLFEARHRNMRRLLENIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17833; Mature: 17702
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVMEKTVLIHGRSPDEVLDFCLDGANFPLIFPEPIRPIGKVDPTQLKITVGREFEFLH CCCHHHCEEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEECCCHHHHH WMLYCIPCKWRVRIAQVHPGTAFVDQMLRGPMKRLRHEHIVRPDPCGTLYTDLVSYEAYG HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GRLVEKLFVNRYMNRLFEARHRNMRRLLENIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAVMEKTVLIHGRSPDEVLDFCLDGANFPLIFPEPIRPIGKVDPTQLKITVGREFEFLH CCHHHCEEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEECCCHHHHH WMLYCIPCKWRVRIAQVHPGTAFVDQMLRGPMKRLRHEHIVRPDPCGTLYTDLVSYEAYG HHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH GRLVEKLFVNRYMNRLFEARHRNMRRLLENIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA