| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610453
Identifier: 121610453
GI number: 121610453
Start: 3893289
End: 3893648
Strand: Direct
Name: 121610453
Synonym: Veis_3523
Alternate gene names: NA
Gene position: 3893289-3893648 (Clockwise)
Preceding gene: 121610452
Following gene: 121610454
Centisome position: 69.94
GC content: 65.83
Gene sequence:
>360_bases ATGCAGCCCTGGCAGCGCGGCTTTACGCTGGTGGAAGTGCTGGTGGCCCTGGCCATCGTGGCGATTGCGCTGATGGCGGG CCTGCAGGCCACCACCGCGCTGACGCGCAACGCATTGCGGCAGGCCGACATCATGCTGGCCCAACTGTGCGCCGAAAACG AGCTGGTCAAGGCCCGTCTGTCGAGCCAGATGCCCAGTGTGGGCGACAGCTCGCTGGTCTGCGAACAGGCCGGGCGCCAG TTGCAGGTTCTGCTGATCGTGCGCCCCACGCCCAACCCGGCCTTCAGGCGCGTCGATGCGCAGGTGTTCGATGGCGACCG TTCGATCTTGCGCATTTCCACCATCATCGGGCGCTATTGA
Upstream 100 bases:
>100_bases GCCCGCAGCAGGTGCAAATCGGCCACCCCTCGTACCCCGGGCGCAGCTTGCGCGTCGTCACCGATGGTGTGCGCCCTTTC GCCGTCGAGTCGGTGCCGTG
Downstream 100 bases:
>100_bases GCGACTGGACATGACCGGGACCATCGCGCGATCACTGGAGCACCTCCGCCTTCGGCTGCGGTATGAGCGCCTCCGGGCGG CCGCGCGGCGCTCACCGGAG
Product: general secretion pathway protein I
Products: NA
Alternate protein names: Type II Secretion System Protein I/J
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MQPWQRGFTLVEVLVALAIVAIALMAGLQATTALTRNALRQADIMLAQLCAENELVKARLSSQMPSVGDSSLVCEQAGRQ LQVLLIVRPTPNPAFRRVDAQVFDGDRSILRISTIIGRY
Sequences:
>Translated_119_residues MQPWQRGFTLVEVLVALAIVAIALMAGLQATTALTRNALRQADIMLAQLCAENELVKARLSSQMPSVGDSSLVCEQAGRQ LQVLLIVRPTPNPAFRRVDAQVFDGDRSILRISTIIGRY >Mature_119_residues MQPWQRGFTLVEVLVALAIVAIALMAGLQATTALTRNALRQADIMLAQLCAENELVKARLSSQMPSVGDSSLVCEQAGRQ LQVLLIVRPTPNPAFRRVDAQVFDGDRSILRISTIIGRY
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13019; Mature: 13019
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPWQRGFTLVEVLVALAIVAIALMAGLQATTALTRNALRQADIMLAQLCAENELVKARL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SSQMPSVGDSSLVCEQAGRQLQVLLIVRPTPNPAFRRVDAQVFDGDRSILRISTIIGRY HHCCCCCCCHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MQPWQRGFTLVEVLVALAIVAIALMAGLQATTALTRNALRQADIMLAQLCAENELVKARL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SSQMPSVGDSSLVCEQAGRQLQVLLIVRPTPNPAFRRVDAQVFDGDRSILRISTIIGRY HHCCCCCCCHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA