| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is pknK [H]
Identifier: 121609879
GI number: 121609879
Start: 3281536
End: 3284295
Strand: Direct
Name: pknK [H]
Synonym: Veis_2932
Alternate gene names: 121609879
Gene position: 3281536-3284295 (Clockwise)
Preceding gene: 121609878
Following gene: 121609880
Centisome position: 58.95
GC content: 70.76
Gene sequence:
>2760_bases ATGAGCCGCAGTCTTGCGGTGCCGTCCGGGCGCAGGCCCGAACCGGTCGCCAGCGCCAAGCTGCTTGCGCCGCGCCCGCC GCGCCGGCTGGTGCCGCGCGATGCGTTGCAGGCGCGGCTGCTGCAAGCCCGGCGCCAGCGCTGCGTGGTCGTGCAGGGGC CCGCAGGCAGCGGCAAGACCAGCACGCTGGTGGCCTGGCGGCAGGCGCTGCTGGCGCTGGACTTCGACGTGGCCTGGCTG TCCCTTTCGGCCGAGGATTGCGCGCCGGCACGCTTTTTCGACTGCCTGCTGGCGAGCATCGGCGCGATCGATCCCGATGC GGTGCGCGAGGCGGCGCTCCTGCTCGGGCAGGGCAACGACGATTCGGCGCTCGAGCATGCCGTGATCACCGTCGTGCAGG CCATCGCGTCGCGGCCACGGGAACTGGTGCTGATGCTCGACGATCTCCAGCACCTGCAAGACGCCCGCATCTTCCGGGCG CTGCAGTGGCTGCTCGACTACGCGCCACCGAAACTGCACCTTGTCCTGACTTCGCGCAATGCCCTGCCGCTGTCGTTCGT GCGGCTTCGTTCGCAAGGACTGGTGAGCGAATTCGACCTGCGCGACCTGCGCTTTTCCGCCGAAGAAACCGGGCGCTTCC TGCGCGAGCGACTGGGCAGCATCGACCTGCGCGACATGCAGGCGCTGCACGAACTGACCGACGGCTGGGTGGCGGGCCTG CAACTGTTCGTGCCCGGCTTGCAGGCCGGGCGGGGCGCCGCATACGCCCGGGCGCAGGCGCGTGATGCGCAGGTCTTTGC GCGCTATTTCGAGCGCGAAGTGCTGGCGCATCTGGCGCATGAAGACCTGGCACTGCTCACCAGGATGGCTGTTTGCAACC GTTTCAGTGCCTCCTTGTGCGCCGCGCTGATGGGGCAGCAGGATGCCGGCGGCATGGCGCTGCGGCTGGCGCGCCTGGAC GGCGGGAACCTGTTCATCAGTCGGGTCGGCGGCCATGGCCGCGACGACTGGTACCGCGTGCATCCGCTCCTGCGGGAGAC ACTGATGGCACGCTTGGAAAGACGCCCCGGCGCCGAGCGCCGCGCGCTGCATGGCGCGGCCTGGCGCTGGTTCGAAGCGC ACGGGCATATCGGCGAGGTTGTGCGCCATGCCGTGCTGGCGGGCGACGCGCACGCGGCGGCGGACATCGTGCAGGCTTGC GCGTCCGACCTGATGGCCCAGGGCGAACTGGCCGCGCTCGGCGGCCTGATGCGCAGATTGCCCGCAGCGCAGGTGCAGGC GCGTCTTGCGCTGCGGCTGGCTGCGGCCTACCTGCATATGTACGCGCGCAACATCCAGGCGCTCGAGAGCGAACTGGCGC AACTGCAGGCGCAGTGGGACAGCCTGGACATGCAGCAACACCACGATATGGCGCTGCTGCGCGGCGGCCTGGCCCTGCAG CGCGACGACACCGAGGCGCTGCTGGCGCTCGCGCCGCAGCTTCGGGCCATCCCGGACGACAGGCCGCCCCTCTTTGCCGG GCGCTGCCACCTGTTGGCCTGGATGCTGATGCACCGCGACGCATACGGCCAGGCCCGCGTGCTGCTGGACCAGGCCGCGC AGCAACGAGGCAGCGCGCCGGCGCGTCGTCTGATCGGGCGCTGCTTGGCCGGCATGAGCTACGCGCTCGAAGGCCGCATG ACCGAGGCCGAGCAACTGCTGCGCGAGGTTCTGCAAGAGGCGCAAGGGCAAGGCGCGGCCAGGATCGGGGTGGCCAGCAT GGCGGCGGGCCTGCTGAGCGACATGCTCTACGAGTGCAACGAACTCGAAGCCGCCTGCAGCCTGCTCGAACCCCGCATCG AAGTGCTCGAGCGCGCCTCGATTCCCGATGCGGTGCTGCGCGCCTTCGTCGTCTTGGCATGTGCGCACTGGCTGACGGGC CGGCGCCTGCAAGCGCTCGGCCACCTCCAGCGCCTGGAAGACTACGCCGCGCGCAACGGGCTCGACCGCCTGCTCGCACA TGCGCTACGGCTGCGCATGCGCCTGCACCTCAAGCAAGGCCAGACCATGCAGGCCGACATGGTGTTCGGGCGGATCGAGG TGCTCGGCGCACGGCACGCCGGGGCCGGCAAGGGCACGGCAGCCGAGACCTGGCGCACCACCGAGCGCGCACGCGCCGAC ATGCGCCTGCACTGGAACGACTTCGGCGCCGCCGTCGACTGCCTCGGAGCGCTCGTGCAGCGCACGGCTTCGGCCGGCCG GCTGCGCACCCTGGCGGCCCTGCAGTTGCAACTGGCCGTTGCGGAATCGGGGCGCGGCAACCAGCAGGGCGCGCGCCACC AGGCCATCGAAGCCCTGCGCCTGGGCCATCGGCTCGGGTTGGTGCGCAGCCTGCTGGACGTGTCGACGAACGTGCCAGCG CTGCTCGATGCGCTGCTGGCGGATGCGGTGCCCGATCCGGTTCTCGCGTTCTATGCACGGCGGCTGCTGGATGCAGCCGC AGCCACGCGGCGCATGGGTGCGGCCAGCGGCGGCGCAACGGACGCCGCAGCCGAAGGCAGCGCCGCCGATTTGCTCAACG CGCGCGAGCGCGAGGTGCTCAGCCTCGTGGCGCAGGCCATGCCGAACAAGAAGATCGCTCGCGTGCTGGGCGTCACACCG CACACCGTGAAGTGGCATCTGCGCAAGGTCTACAGCAAACTGGGCGTCGCCGAGCGCGGCGAAGCGGTCGCGCGCATGCG CGATCTCGCGCTGCCTCGGGAAACCCCCAGGTCCCGCTGA
Upstream 100 bases:
>100_bases TGCCGAATGGCGCAGCGCGCGCGCCTGACCGGCAGCGACGCGCCCGATACTGTGGGCCATCCCTTTTTCTTTTCCTTTTC CCGCGCCCATGGGTGATGTC
Downstream 100 bases:
>100_bases ACTGCGGCCAGTGTCGCGTCATCGGTCCGATGTCGCAGGCTGCGCGCAGCCATCGGAGCGCAGCGCAAGGCGCAGCGCGC AGCCCATACCGAGCGTACTG
Product: regulatory protein LuxR
Products: NA
Alternate protein names: Protein kinase K [H]
Number of amino acids: Translated: 919; Mature: 918
Protein sequence:
>919_residues MSRSLAVPSGRRPEPVASAKLLAPRPPRRLVPRDALQARLLQARRQRCVVVQGPAGSGKTSTLVAWRQALLALDFDVAWL SLSAEDCAPARFFDCLLASIGAIDPDAVREAALLLGQGNDDSALEHAVITVVQAIASRPRELVLMLDDLQHLQDARIFRA LQWLLDYAPPKLHLVLTSRNALPLSFVRLRSQGLVSEFDLRDLRFSAEETGRFLRERLGSIDLRDMQALHELTDGWVAGL QLFVPGLQAGRGAAYARAQARDAQVFARYFEREVLAHLAHEDLALLTRMAVCNRFSASLCAALMGQQDAGGMALRLARLD GGNLFISRVGGHGRDDWYRVHPLLRETLMARLERRPGAERRALHGAAWRWFEAHGHIGEVVRHAVLAGDAHAAADIVQAC ASDLMAQGELAALGGLMRRLPAAQVQARLALRLAAAYLHMYARNIQALESELAQLQAQWDSLDMQQHHDMALLRGGLALQ RDDTEALLALAPQLRAIPDDRPPLFAGRCHLLAWMLMHRDAYGQARVLLDQAAQQRGSAPARRLIGRCLAGMSYALEGRM TEAEQLLREVLQEAQGQGAARIGVASMAAGLLSDMLYECNELEAACSLLEPRIEVLERASIPDAVLRAFVVLACAHWLTG RRLQALGHLQRLEDYAARNGLDRLLAHALRLRMRLHLKQGQTMQADMVFGRIEVLGARHAGAGKGTAAETWRTTERARAD MRLHWNDFGAAVDCLGALVQRTASAGRLRTLAALQLQLAVAESGRGNQQGARHQAIEALRLGHRLGLVRSLLDVSTNVPA LLDALLADAVPDPVLAFYARRLLDAAAATRRMGAASGGATDAAAEGSAADLLNAREREVLSLVAQAMPNKKIARVLGVTP HTVKWHLRKVYSKLGVAERGEAVARMRDLALPRETPRSR
Sequences:
>Translated_919_residues MSRSLAVPSGRRPEPVASAKLLAPRPPRRLVPRDALQARLLQARRQRCVVVQGPAGSGKTSTLVAWRQALLALDFDVAWL SLSAEDCAPARFFDCLLASIGAIDPDAVREAALLLGQGNDDSALEHAVITVVQAIASRPRELVLMLDDLQHLQDARIFRA LQWLLDYAPPKLHLVLTSRNALPLSFVRLRSQGLVSEFDLRDLRFSAEETGRFLRERLGSIDLRDMQALHELTDGWVAGL QLFVPGLQAGRGAAYARAQARDAQVFARYFEREVLAHLAHEDLALLTRMAVCNRFSASLCAALMGQQDAGGMALRLARLD GGNLFISRVGGHGRDDWYRVHPLLRETLMARLERRPGAERRALHGAAWRWFEAHGHIGEVVRHAVLAGDAHAAADIVQAC ASDLMAQGELAALGGLMRRLPAAQVQARLALRLAAAYLHMYARNIQALESELAQLQAQWDSLDMQQHHDMALLRGGLALQ RDDTEALLALAPQLRAIPDDRPPLFAGRCHLLAWMLMHRDAYGQARVLLDQAAQQRGSAPARRLIGRCLAGMSYALEGRM TEAEQLLREVLQEAQGQGAARIGVASMAAGLLSDMLYECNELEAACSLLEPRIEVLERASIPDAVLRAFVVLACAHWLTG RRLQALGHLQRLEDYAARNGLDRLLAHALRLRMRLHLKQGQTMQADMVFGRIEVLGARHAGAGKGTAAETWRTTERARAD MRLHWNDFGAAVDCLGALVQRTASAGRLRTLAALQLQLAVAESGRGNQQGARHQAIEALRLGHRLGLVRSLLDVSTNVPA LLDALLADAVPDPVLAFYARRLLDAAAATRRMGAASGGATDAAAEGSAADLLNAREREVLSLVAQAMPNKKIARVLGVTP HTVKWHLRKVYSKLGVAERGEAVARMRDLALPRETPRSR >Mature_918_residues SRSLAVPSGRRPEPVASAKLLAPRPPRRLVPRDALQARLLQARRQRCVVVQGPAGSGKTSTLVAWRQALLALDFDVAWLS LSAEDCAPARFFDCLLASIGAIDPDAVREAALLLGQGNDDSALEHAVITVVQAIASRPRELVLMLDDLQHLQDARIFRAL QWLLDYAPPKLHLVLTSRNALPLSFVRLRSQGLVSEFDLRDLRFSAEETGRFLRERLGSIDLRDMQALHELTDGWVAGLQ LFVPGLQAGRGAAYARAQARDAQVFARYFEREVLAHLAHEDLALLTRMAVCNRFSASLCAALMGQQDAGGMALRLARLDG GNLFISRVGGHGRDDWYRVHPLLRETLMARLERRPGAERRALHGAAWRWFEAHGHIGEVVRHAVLAGDAHAAADIVQACA SDLMAQGELAALGGLMRRLPAAQVQARLALRLAAAYLHMYARNIQALESELAQLQAQWDSLDMQQHHDMALLRGGLALQR DDTEALLALAPQLRAIPDDRPPLFAGRCHLLAWMLMHRDAYGQARVLLDQAAQQRGSAPARRLIGRCLAGMSYALEGRMT EAEQLLREVLQEAQGQGAARIGVASMAAGLLSDMLYECNELEAACSLLEPRIEVLERASIPDAVLRAFVVLACAHWLTGR RLQALGHLQRLEDYAARNGLDRLLAHALRLRMRLHLKQGQTMQADMVFGRIEVLGARHAGAGKGTAAETWRTTERARADM RLHWNDFGAAVDCLGALVQRTASAGRLRTLAALQLQLAVAESGRGNQQGARHQAIEALRLGHRLGLVRSLLDVSTNVPAL LDALLADAVPDPVLAFYARRLLDAAAATRRMGAASGGATDAAAEGSAADLLNAREREVLSLVAQAMPNKKIARVLGVTPH TVKWHLRKVYSKLGVAERGEAVARMRDLALPRETPRSR
Specific function: Modulates the activity of transcription regulator virS via phosphorylation [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cell membrane. Note=Probably attached to cell membrane through interactions mediated by its C- terminal region (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=428, Percent_Identity=26.6355140186916, Blast_Score=104, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR016236 - InterPro: IPR011990 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 100513; Mature: 100381
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSLAVPSGRRPEPVASAKLLAPRPPRRLVPRDALQARLLQARRQRCVVVQGPAGSGKT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCH STLVAWRQALLALDFDVAWLSLSAEDCAPARFFDCLLASIGAIDPDAVREAALLLGQGND HHHHHHHHHHHHHCCCHHHEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC DSALEHAVITVVQAIASRPRELVLMLDDLQHLQDARIFRALQWLLDYAPPKLHLVLTSRN CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC ALPLSFVRLRSQGLVSEFDLRDLRFSAEETGRFLRERLGSIDLRDMQALHELTDGWVAGL CCCHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QLFVPGLQAGRGAAYARAQARDAQVFARYFEREVLAHLAHEDLALLTRMAVCNRFSASLC HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALMGQQDAGGMALRLARLDGGNLFISRVGGHGRDDWYRVHPLLRETLMARLERRPGAER HHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH RALHGAAWRWFEAHGHIGEVVRHAVLAGDAHAAADIVQACASDLMAQGELAALGGLMRRL HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC PAAQVQARLALRLAAAYLHMYARNIQALESELAQLQAQWDSLDMQQHHDMALLRGGLALQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE RDDTEALLALAPQLRAIPDDRPPLFAGRCHLLAWMLMHRDAYGQARVLLDQAAQQRGSAP CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH ARRLIGRCLAGMSYALEGRMTEAEQLLREVLQEAQGQGAARIGVASMAAGLLSDMLYECN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELEAACSLLEPRIEVLERASIPDAVLRAFVVLACAHWLTGRRLQALGHLQRLEDYAARNG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC LDRLLAHALRLRMRLHLKQGQTMQADMVFGRIEVLGARHAGAGKGTAAETWRTTERARAD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC MRLHWNDFGAAVDCLGALVQRTASAGRLRTLAALQLQLAVAESGRGNQQGARHQAIEALR CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LGHRLGLVRSLLDVSTNVPALLDALLADAVPDPVLAFYARRLLDAAAATRRMGAASGGAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DAAAEGSAADLLNAREREVLSLVAQAMPNKKIARVLGVTPHTVKWHLRKVYSKLGVAERG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH EAVARMRDLALPRETPRSR HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SRSLAVPSGRRPEPVASAKLLAPRPPRRLVPRDALQARLLQARRQRCVVVQGPAGSGKT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCH STLVAWRQALLALDFDVAWLSLSAEDCAPARFFDCLLASIGAIDPDAVREAALLLGQGND HHHHHHHHHHHHHCCCHHHEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC DSALEHAVITVVQAIASRPRELVLMLDDLQHLQDARIFRALQWLLDYAPPKLHLVLTSRN CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC ALPLSFVRLRSQGLVSEFDLRDLRFSAEETGRFLRERLGSIDLRDMQALHELTDGWVAGL CCCHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QLFVPGLQAGRGAAYARAQARDAQVFARYFEREVLAHLAHEDLALLTRMAVCNRFSASLC HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALMGQQDAGGMALRLARLDGGNLFISRVGGHGRDDWYRVHPLLRETLMARLERRPGAER HHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH RALHGAAWRWFEAHGHIGEVVRHAVLAGDAHAAADIVQACASDLMAQGELAALGGLMRRL HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC PAAQVQARLALRLAAAYLHMYARNIQALESELAQLQAQWDSLDMQQHHDMALLRGGLALQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE RDDTEALLALAPQLRAIPDDRPPLFAGRCHLLAWMLMHRDAYGQARVLLDQAAQQRGSAP CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH ARRLIGRCLAGMSYALEGRMTEAEQLLREVLQEAQGQGAARIGVASMAAGLLSDMLYECN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELEAACSLLEPRIEVLERASIPDAVLRAFVVLACAHWLTGRRLQALGHLQRLEDYAARNG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC LDRLLAHALRLRMRLHLKQGQTMQADMVFGRIEVLGARHAGAGKGTAAETWRTTERARAD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC MRLHWNDFGAAVDCLGALVQRTASAGRLRTLAALQLQLAVAESGRGNQQGARHQAIEALR CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LGHRLGLVRSLLDVSTNVPALLDALLADAVPDPVLAFYARRLLDAAAATRRMGAASGGAT HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DAAAEGSAADLLNAREREVLSLVAQAMPNKKIARVLGVTPHTVKWHLRKVYSKLGVAERG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHH EAVARMRDLALPRETPRSR HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]