Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is yihN [H]

Identifier: 121609855

GI number: 121609855

Start: 3255617

End: 3256888

Strand: Direct

Name: yihN [H]

Synonym: Veis_2908

Alternate gene names: 121609855

Gene position: 3255617-3256888 (Clockwise)

Preceding gene: 121609854

Following gene: 121609856

Centisome position: 58.48

GC content: 57.47

Gene sequence:

>1272_bases
ATGTCGAGCAACACCATGCTGCACGCACCACCTTCGCGCAATCTGAAACGCTATTTGCAGTTTTCCCTGCTGCTTTTGGC
AGCGGGAGCGATTTATCCATTGCTCTACCTGCGCCAGAATTTTGAGACCAGCGTTCTGGCAGCATTTGGCATTTCTGCTG
ACGAACTCGGCCAATTCTATTCCTTGCTCGGCATCATCTATGCGCTGAGTTATTTGCCGAGTGGCTGGTTGGCCGACCGG
TTTTCACCGCGCCTGCTGATCTGTTTTTCATTGTCCGTGGTGGGTTTGCTGGGACTGTGGTTTTCGACCTATCCCGGCCC
TGCCGCGCTGCGTTGGATTTTCATCGGTTGGGGCTTGGCGGCGGGGCTGACGTTCTGGGCCTCCCTGATCAAAGGCGTCA
AGCTGTTGGCGCAGGCCTCTGAGCAGGGGCGTTTCTTCGGCATTCTGGATGGTGGGCGCGGCTTGATCGAAGCGCTGCTG
GCGACTGCCGCCGTCGCCCTGTTTGCCATGGCCAGTGACGCAGCGCCACAGGCAGCGTTGCGCCCGGTCATTTATATGTA
CTCCTTCACCTGCCTGGCGATTGCGTTATTGGTGTTGGTGTTTCTTGGGCAAGAACCTGCCGCCGCACCCGCTCCGACGA
AAGTGCGCGGCGGACTTTGGCAAGACCTCAAAACACTCGCTGCGATACCCCGCTTGTGGCTCATGGCGCTGATCATTTTT
TGCGGCTACCAGATATTTTGGGCGACATATTCTTTCTCCGCCTATTTACAACAGGGGTACGGCATGAGCGCAGTTGCCGC
CGGCGTCATCACCGTCATCAAGCTATGGATGCGTCCTGTCGGAGGGATAGTCGGCGGGTTTCTGGGAGACCGCTGCGGCA
ACGCGGCGACACTGGCCTGGAGCATGCTGTTGGCCGCGCTCGGCCTGACTGCGCTGATTCTTTTTCCGGCGGGCAGCGGC
GTTTATTTTATGCTGACCCTCGTCATCCTGATCGGCGTGATGACCTATGCCATACGCGGTTTGTACTGGTCGCTGCTGGA
GTCTTGCGCGGTGCCGGAAAAAATCACCGGCCTGGCCATCGGTATCGTCTCCGTCATCGCCTATTTGCCGGATATTTTCC
TGCCCATGATCAACAGCGCCATCTCGTACCACTATCCCGGCCTGCCCGGCTACAAAATATATTTCGGCTACATCGTCGCC
TGCGGATTGGGCGGCACGGCAGTCGCTTTCTACTTCAAAAACCTGACCCAACGAGAAAAGGTGCAGCAATGA

Upstream 100 bases:

>100_bases
AGGACGCCATCATTATCGAAACCCCCGGTGGCGGCGGCTACGGGCCGGTTTCCCGCCAATCCACTGCATCACACAACGAG
ACAACGACAGGAAAGAGTCC

Downstream 100 bases:

>100_bases
AAATCATATCGATGAAATCCCATGTGGTTGCCGTGCCGCCGCCCTATATCGGCGGCATGTACTGGATTTTCGTCACCCTG
AAAACCGCTTGCGGCATCGA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFYSLLGIIYALSYLPSGWLADR
FSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLAAGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALL
ATAAVALFAMASDAAPQAALRPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF
CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAWSMLLAALGLTALILFPAGSG
VYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAIGIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVA
CGLGGTAVAFYFKNLTQREKVQQ

Sequences:

>Translated_423_residues
MSSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFYSLLGIIYALSYLPSGWLADR
FSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLAAGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALL
ATAAVALFAMASDAAPQAALRPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF
CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAWSMLLAALGLTALILFPAGSG
VYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAIGIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVA
CGLGGTAVAFYFKNLTQREKVQQ
>Mature_422_residues
SSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFYSLLGIIYALSYLPSGWLADRF
SPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLAAGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALLA
TAAVALFAMASDAAPQAALRPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIFC
GYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAWSMLLAALGLTALILFPAGSGV
YFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAIGIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVAC
GLGGTAVAFYFKNLTQREKVQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1790306, Length=412, Percent_Identity=25.2427184466019, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI2367161, Length=377, Percent_Identity=30.2387267904509, Blast_Score=138, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45672; Mature: 45541

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFY
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
SLLGIIYALSYLPSGWLADRFSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLA
HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALLATAAVALFAMASDAAPQAAL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
SMLLAALGLTALILFPAGSGVYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVACGLGGTAVAFYFKNLTQREK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VQQ
CCC
>Mature Secondary Structure 
SSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFY
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
SLLGIIYALSYLPSGWLADRFSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLA
HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALLATAAVALFAMASDAAPQAAL
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH
CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
SMLLAALGLTALILFPAGSGVYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVACGLGGTAVAFYFKNLTQREK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VQQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]