Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609850

Identifier: 121609850

GI number: 121609850

Start: 3246802

End: 3247785

Strand: Direct

Name: 121609850

Synonym: Veis_2903

Alternate gene names: NA

Gene position: 3246802-3247785 (Clockwise)

Preceding gene: 121609849

Following gene: 121609851

Centisome position: 58.32

GC content: 65.24

Gene sequence:

>984_bases
ATGCAACGTCGGGCTTTTCTTCACATCCTGTCCGTGGCCGTGGCGGGCGCGGGAATGCTTTGCGCGCAGGCGCTGGCTGC
GGATGCGTTTCCCGGCAAACCGGTGCGCATTCTCGTGGGCTTTTCACCGGGCGGCTCCAATGACATCGTGGCGCGCCTGA
TAGCGCCCAAACTGGCCGAAGGGTTGGGGCAGCAGGTCATGGTCGAAAACAGGCCCGGTGCCGGGGGAAACATCGCCGTG
TCCGCATTGCTGTCGGCCCCTGCCGACGGCCACACGCTCCTGATGTGCACGACCGGAACCTTGTCGATACAGCCCCACTT
GGTCAAGAGCATGCCCTTCGACCCGGAAAAAGACCTCGTGGCGGTCACGCAGATCATCGATGCGCCCTATATGCTGATGG
TCAATGCCCGGTTGCCGGTCAGCACTGTGCAGGAACTGGTCGCCTACGCCAGGAACCGGCCAGGCGAACTCAACTTTGCC
TCGTCCGGCGCCGGCACGGGCAGCCATCTGGCCGGTGAGATGCTCAAGTCGCGCACCGGTATCGACATCGTTCACATTGC
CTACAAAGGCACAGGCCAGGCCATGGCGGATGTGCTGGAGGGCGCCGTGTCGATGATCTTCGATCAGCCCGTCAGCTCGA
TGCAGTACGCGCGCGCCGGCAAGCTGCGGGCGTTGGCCGTCGCCGGCCCGAAGCGCCTGGCCGCATTCCCCGAGGTGCCC
ACCGTGATGGAAGCCGGCATCGCCGAGTTCGAGCCGGTGACCTGGTCGGGCATCTGCGCCGCCAGGAACACGCCGCCGGC
CGCCATCGAGCGCATACAGCGCGAGATCGCCAAGGTTCTCGCCATGCCCGGGATTGCCCGACGCCTGGTGCAGGACGGTC
TGGAGCCGGTGGGCAGCACGCCTGCCAGGTTCCACGACTTTCTCGTCGCCAACAAACGCACATGGGGGAAGGTGATCGAG
AGCACCGACCTCAAGCCCGAATGA

Upstream 100 bases:

>100_bases
GCCGGCGCATCGCACGGGCGCGCGCGCAGCTTGGCCCCTGAGCGGCGCCCGGGGTACCTGCATCGGCCGCACCGTCAATG
TCTGCAACATGGGAACTCGC

Downstream 100 bases:

>100_bases
GCATGACCGAGTGAGCATGAAAAAACGAAACGGCGCGATGCGACGGCGCGCCTGGGCAGCGGCTGCCTTGCTGGCAACGC
TTGCAGGCGCCTCGTTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQRRAFLHILSVAVAGAGMLCAQALAADAFPGKPVRILVGFSPGGSNDIVARLIAPKLAEGLGQQVMVENRPGAGGNIAV
SALLSAPADGHTLLMCTTGTLSIQPHLVKSMPFDPEKDLVAVTQIIDAPYMLMVNARLPVSTVQELVAYARNRPGELNFA
SSGAGTGSHLAGEMLKSRTGIDIVHIAYKGTGQAMADVLEGAVSMIFDQPVSSMQYARAGKLRALAVAGPKRLAAFPEVP
TVMEAGIAEFEPVTWSGICAARNTPPAAIERIQREIAKVLAMPGIARRLVQDGLEPVGSTPARFHDFLVANKRTWGKVIE
STDLKPE

Sequences:

>Translated_327_residues
MQRRAFLHILSVAVAGAGMLCAQALAADAFPGKPVRILVGFSPGGSNDIVARLIAPKLAEGLGQQVMVENRPGAGGNIAV
SALLSAPADGHTLLMCTTGTLSIQPHLVKSMPFDPEKDLVAVTQIIDAPYMLMVNARLPVSTVQELVAYARNRPGELNFA
SSGAGTGSHLAGEMLKSRTGIDIVHIAYKGTGQAMADVLEGAVSMIFDQPVSSMQYARAGKLRALAVAGPKRLAAFPEVP
TVMEAGIAEFEPVTWSGICAARNTPPAAIERIQREIAKVLAMPGIARRLVQDGLEPVGSTPARFHDFLVANKRTWGKVIE
STDLKPE
>Mature_327_residues
MQRRAFLHILSVAVAGAGMLCAQALAADAFPGKPVRILVGFSPGGSNDIVARLIAPKLAEGLGQQVMVENRPGAGGNIAV
SALLSAPADGHTLLMCTTGTLSIQPHLVKSMPFDPEKDLVAVTQIIDAPYMLMVNARLPVSTVQELVAYARNRPGELNFA
SSGAGTGSHLAGEMLKSRTGIDIVHIAYKGTGQAMADVLEGAVSMIFDQPVSSMQYARAGKLRALAVAGPKRLAAFPEVP
TVMEAGIAEFEPVTWSGICAARNTPPAAIERIQREIAKVLAMPGIARRLVQDGLEPVGSTPARFHDFLVANKRTWGKVIE
STDLKPE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34447; Mature: 34447

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRAFLHILSVAVAGAGMLCAQALAADAFPGKPVRILVGFSPGGSNDIVARLIAPKLAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
GLGQQVMVENRPGAGGNIAVSALLSAPADGHTLLMCTTGTLSIQPHLVKSMPFDPEKDLV
CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEECCHHHHCCCCCCCHHHH
AVTQIIDAPYMLMVNARLPVSTVQELVAYARNRPGELNFASSGAGTGSHLAGEMLKSRTG
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCC
IDIVHIAYKGTGQAMADVLEGAVSMIFDQPVSSMQYARAGKLRALAVAGPKRLAAFPEVP
CEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCHHHHCCCCCCC
TVMEAGIAEFEPVTWSGICAARNTPPAAIERIQREIAKVLAMPGIARRLVQDGLEPVGST
HHHHCCCHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
PARFHDFLVANKRTWGKVIESTDLKPE
HHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRRAFLHILSVAVAGAGMLCAQALAADAFPGKPVRILVGFSPGGSNDIVARLIAPKLAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
GLGQQVMVENRPGAGGNIAVSALLSAPADGHTLLMCTTGTLSIQPHLVKSMPFDPEKDLV
CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEECCHHHHCCCCCCCHHHH
AVTQIIDAPYMLMVNARLPVSTVQELVAYARNRPGELNFASSGAGTGSHLAGEMLKSRTG
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCC
IDIVHIAYKGTGQAMADVLEGAVSMIFDQPVSSMQYARAGKLRALAVAGPKRLAAFPEVP
CEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCHHHHCCCCCCC
TVMEAGIAEFEPVTWSGICAARNTPPAAIERIQREIAKVLAMPGIARRLVQDGLEPVGST
HHHHCCCHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
PARFHDFLVANKRTWGKVIESTDLKPE
HHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]