The gene/protein map for NC_008786 is currently unavailable.
Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609772

Identifier: 121609772

GI number: 121609772

Start: 3171329

End: 3172378

Strand: Direct

Name: 121609772

Synonym: Veis_2823

Alternate gene names: NA

Gene position: 3171329-3172378 (Clockwise)

Preceding gene: 121609771

Following gene: 121609773

Centisome position: 56.97

GC content: 63.14

Gene sequence:

>1050_bases
ATGATGCTGCCGGCCTGCCCCATCCGACGCTCGGGTCAGCCAAGCCCGCAGCATGGCATGACGCTGATCGAACTGATGGT
GGCCATGGCGCTGGGCCTGCTGATCGTGCTGGCCGCCGCCGCGTCCTTGCTGTTTGCGCGTGAAGGTTTCACCGCCGTCG
ATGCCGCATCGCAATTGCGCGACAACGGCCGCTTCCTGCAAAACCTGGTGCTGCGCCTGGGAGCGCAAACAGGCTACAAA
AACCTGCGCTTTGCCACCGAAACCAAACGACTGGGCGCCGCGCCCGGCAACGCCCTGGCGCCGCCCGACATCTTTGGCGT
GAACAACGCCAAGCGCGGAACCCAGAGCGAGTGGGACAGTGGCACTGAGCGCCAATCAGGCGAAGTCGGTTATGGCAGTG
ACATTCTGGTGCTGCGCTACCAAACCAGTTCAGCGACTGCCGACAGCGCAACCTCTGACAAAACGATGATCGACTGCGCC
GGCGTCGCCGCAACCAACGCACCGACAGAGCCGGGCGACAAACTGGTGAGCATTCTTTATGTGAAGGAGGACAGCGCCGG
TGCAGAGCCAGCCCTCATGTGCGCGCGCTCCGAGACCGGGGCCGCCCCCTACGATGCCCAGCCCATCATCTCGGGGGTGG
AAAACTTCCAGGTGCTCTATGGCGTCGATGGTATCGGCCCTGCCAACACCGCAGTTCCCGGCACGACAGACAGGGTTGCT
GACCGCTATCTGCGCGCGGACCAGTTGACAGTGTCCGACGGTCAGCCGGCCTCTATCAATAAGGCGGCCACTTACGCCAA
CTGGCGCCGGGTGCGCAGCATCCGCATTGGCGTCGTGCTTCGGGGGCCACCCGGTTCGGCCAAGCCGGACGGTGGCAATC
AAACCTTTTATCCCCTCGGAATCACAAAAGACTCCGCTTCAGGAACCGAAGGCGCGGCTTTTTCCAGCAGCAATGACCCG
GGCAGCAGATACACCCCCCCGTTTGATGGCCGCCTGCGCCAGACCCTGACTTTCACCGTGCATCTGCGCAACGCCCAGGA
TGAAAACTGA

Upstream 100 bases:

>100_bases
TTCCGGTCACCGGCGGGGACCCCGCACCGGCCACCGGCACCACGCCAGCCGCCAGCACACCGGTCGCCAACGCCGCACCA
GCCGCCGGCAGGAGCACCAC

Downstream 100 bases:

>100_bases
CATGCCCACCTGCAAACCGGGGCTGCGGCCCCTCCCTGCTTCTTCGAGACCGGCGAGACAACGTGGCTTGTCGCTGATCA
TCGTCATGCTGATACTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: PilW Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein PilW

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MMLPACPIRRSGQPSPQHGMTLIELMVAMALGLLIVLAAAASLLFAREGFTAVDAASQLRDNGRFLQNLVLRLGAQTGYK
NLRFATETKRLGAAPGNALAPPDIFGVNNAKRGTQSEWDSGTERQSGEVGYGSDILVLRYQTSSATADSATSDKTMIDCA
GVAATNAPTEPGDKLVSILYVKEDSAGAEPALMCARSETGAAPYDAQPIISGVENFQVLYGVDGIGPANTAVPGTTDRVA
DRYLRADQLTVSDGQPASINKAATYANWRRVRSIRIGVVLRGPPGSAKPDGGNQTFYPLGITKDSASGTEGAAFSSSNDP
GSRYTPPFDGRLRQTLTFTVHLRNAQDEN

Sequences:

>Translated_349_residues
MMLPACPIRRSGQPSPQHGMTLIELMVAMALGLLIVLAAAASLLFAREGFTAVDAASQLRDNGRFLQNLVLRLGAQTGYK
NLRFATETKRLGAAPGNALAPPDIFGVNNAKRGTQSEWDSGTERQSGEVGYGSDILVLRYQTSSATADSATSDKTMIDCA
GVAATNAPTEPGDKLVSILYVKEDSAGAEPALMCARSETGAAPYDAQPIISGVENFQVLYGVDGIGPANTAVPGTTDRVA
DRYLRADQLTVSDGQPASINKAATYANWRRVRSIRIGVVLRGPPGSAKPDGGNQTFYPLGITKDSASGTEGAAFSSSNDP
GSRYTPPFDGRLRQTLTFTVHLRNAQDEN
>Mature_349_residues
MMLPACPIRRSGQPSPQHGMTLIELMVAMALGLLIVLAAAASLLFAREGFTAVDAASQLRDNGRFLQNLVLRLGAQTGYK
NLRFATETKRLGAAPGNALAPPDIFGVNNAKRGTQSEWDSGTERQSGEVGYGSDILVLRYQTSSATADSATSDKTMIDCA
GVAATNAPTEPGDKLVSILYVKEDSAGAEPALMCARSETGAAPYDAQPIISGVENFQVLYGVDGIGPANTAVPGTTDRVA
DRYLRADQLTVSDGQPASINKAATYANWRRVRSIRIGVVLRGPPGSAKPDGGNQTFYPLGITKDSASGTEGAAFSSSNDP
GSRYTPPFDGRLRQTLTFTVHLRNAQDEN

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36814; Mature: 36814

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLPACPIRRSGQPSPQHGMTLIELMVAMALGLLIVLAAAASLLFAREGFTAVDAASQLR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DNGRFLQNLVLRLGAQTGYKNLRFATETKRLGAAPGNALAPPDIFGVNNAKRGTQSEWDS
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCC
GTERQSGEVGYGSDILVLRYQTSSATADSATSDKTMIDCAGVAATNAPTEPGDKLVSILY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE
VKEDSAGAEPALMCARSETGAAPYDAQPIISGVENFQVLYGVDGIGPANTAVPGTTDRVA
EECCCCCCCHHEEEECCCCCCCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHHH
DRYLRADQLTVSDGQPASINKAATYANWRRVRSIRIGVVLRGPPGSAKPDGGNQTFYPLG
HHHHHHCEEEECCCCCCCCCHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCEEEEEE
ITKDSASGTEGAAFSSSNDPGSRYTPPFDGRLRQTLTFTVHLRNAQDEN
ECCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MMLPACPIRRSGQPSPQHGMTLIELMVAMALGLLIVLAAAASLLFAREGFTAVDAASQLR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DNGRFLQNLVLRLGAQTGYKNLRFATETKRLGAAPGNALAPPDIFGVNNAKRGTQSEWDS
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCC
GTERQSGEVGYGSDILVLRYQTSSATADSATSDKTMIDCAGVAATNAPTEPGDKLVSILY
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE
VKEDSAGAEPALMCARSETGAAPYDAQPIISGVENFQVLYGVDGIGPANTAVPGTTDRVA
EECCCCCCCHHEEEECCCCCCCCCCCCHHHHHHHCEEEEEECCCCCCCCCCCCCCHHHHH
DRYLRADQLTVSDGQPASINKAATYANWRRVRSIRIGVVLRGPPGSAKPDGGNQTFYPLG
HHHHHHCEEEECCCCCCCCCHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCEEEEEE
ITKDSASGTEGAAFSSSNDPGSRYTPPFDGRLRQTLTFTVHLRNAQDEN
ECCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA