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The map label for this gene is bphR [H]

Identifier: 121609747

GI number: 121609747

Start: 3144274

End: 3145035

Strand: Direct

Name: bphR [H]

Synonym: Veis_2798

Alternate gene names: 121609747

Gene position: 3144274-3145035 (Clockwise)

Preceding gene: 121609746

Following gene: 121609769

Centisome position: 56.48

GC content: 69.42

Gene sequence:

>762_bases
ATGCTGCCCACTCACCACATCAACGACAGATCGGCCGGACCATTCAACCGGCTGGCGGCCGAGACGCCCCGAACGCTCGC
GGAGCGGGCCTACCTGGCGGTGCGCCAGGACATCGTGCATGGCCGGCTCGCGCCCGGCGAGCGCCTGCGGGTGGAGCACC
TGAAAGACCGTTATGCGGTGGGCGCGGGCACCCTGCGCGAAGCCCTGGCCCTGCTGGTCTCCGATGCACTGGTCACGGTC
GAGGGCCAGCGCGGCTACCGGGTCTCGGAAATCTCGCTCAGCAACCTCAAGGACCTGACCAACACCCGCGTGATGCTGGA
GACCGAGGCCCTGCGCCAGTCCATCCGCCAGGGCGATGCGGCCTGGGAGAGCGAGCTGACGCAGGCCTTCGAGGTGCTCA
CGCGTGCCGAGCAGCATCCCGGTGGCCTGGAGCCGCTCGAATGGGAGGCGGCCAACAAGCGCTTCCACGAGGCCCTGATC
TCGGCGCACCGCTCGCCCTGGAACAAGCACTTGCTGGGCATCCTGTACCGGCACGGCGAGCGTTACCGGTATGTGGCCAT
CCAGATGGGCGCAGCCCAGACCATCGAGCGCGACGTGCACGACGAACACGCCAGCATCTACAACGCGGCGATGGCGCGCC
AGGAAGCGCGTGCTGCGCTGGCACTGGAAGCCCACATCCGGCTCACCTGCGACATCCTGGTCCAGCACGCCGGCGAGCTG
CAGGCGGCCGCGCGGCAGACCGGCGCACCGTTGCCGGCCTGA

Upstream 100 bases:

>100_bases
GCACGCCTGCTGGGCCTGACGCGGCCGCAACTGGCCTACCGGCTCAAGCGCCAGCAACTGGACGAAGAAACCCCTTGAAA
CCCGCAACGGGACGAACCGC

Downstream 100 bases:

>100_bases
TCACGAAGGGGGAGCCATCTGCGGCGCCTCGGAGCGGGCCTGCCCGGTCCCTGGTCTTGCGGCAGGTAGTGGCCCAGGCG
TCAGATGGGGTGCTTCAGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLPTHHINDRSAGPFNRLAAETPRTLAERAYLAVRQDIVHGRLAPGERLRVEHLKDRYAVGAGTLREALALLVSDALVTV
EGQRGYRVSEISLSNLKDLTNTRVMLETEALRQSIRQGDAAWESELTQAFEVLTRAEQHPGGLEPLEWEAANKRFHEALI
SAHRSPWNKHLLGILYRHGERYRYVAIQMGAAQTIERDVHDEHASIYNAAMARQEARAALALEAHIRLTCDILVQHAGEL
QAAARQTGAPLPA

Sequences:

>Translated_253_residues
MLPTHHINDRSAGPFNRLAAETPRTLAERAYLAVRQDIVHGRLAPGERLRVEHLKDRYAVGAGTLREALALLVSDALVTV
EGQRGYRVSEISLSNLKDLTNTRVMLETEALRQSIRQGDAAWESELTQAFEVLTRAEQHPGGLEPLEWEAANKRFHEALI
SAHRSPWNKHLLGILYRHGERYRYVAIQMGAAQTIERDVHDEHASIYNAAMARQEARAALALEAHIRLTCDILVQHAGEL
QAAARQTGAPLPA
>Mature_253_residues
MLPTHHINDRSAGPFNRLAAETPRTLAERAYLAVRQDIVHGRLAPGERLRVEHLKDRYAVGAGTLREALALLVSDALVTV
EGQRGYRVSEISLSNLKDLTNTRVMLETEALRQSIRQGDAAWESELTQAFEVLTRAEQHPGGLEPLEWEAANKRFHEALI
SAHRSPWNKHLLGILYRHGERYRYVAIQMGAAQTIERDVHDEHASIYNAAMARQEARAALALEAHIRLTCDILVQHAGEL
QAAARQTGAPLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=210, Percent_Identity=32.3809523809524, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28215; Mature: 28215

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTHHINDRSAGPFNRLAAETPRTLAERAYLAVRQDIVHGRLAPGERLRVEHLKDRYAV
CCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GAGTLREALALLVSDALVTVEGQRGYRVSEISLSNLKDLTNTRVMLETEALRQSIRQGDA
CHHHHHHHHHHHHHHHHEEEECCCCCEEECCCHHHHHHHHCCEEEEEHHHHHHHHHHCCH
AWESELTQAFEVLTRAEQHPGGLEPLEWEAANKRFHEALISAHRSPWNKHLLGILYRHGE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
RYRYVAIQMGAAQTIERDVHDEHASIYNAAMARQEARAALALEAHIRLTCDILVQHAGEL
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAARQTGAPLPA
HHHHHHCCCCCCC
>Mature Secondary Structure
MLPTHHINDRSAGPFNRLAAETPRTLAERAYLAVRQDIVHGRLAPGERLRVEHLKDRYAV
CCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GAGTLREALALLVSDALVTVEGQRGYRVSEISLSNLKDLTNTRVMLETEALRQSIRQGDA
CHHHHHHHHHHHHHHHHEEEECCCCCEEECCCHHHHHHHHCCEEEEEHHHHHHHHHHCCH
AWESELTQAFEVLTRAEQHPGGLEPLEWEAANKRFHEALISAHRSPWNKHLLGILYRHGE
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
RYRYVAIQMGAAQTIERDVHDEHASIYNAAMARQEARAALALEAHIRLTCDILVQHAGEL
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAARQTGAPLPA
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]