Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121609694

Identifier: 121609694

GI number: 121609694

Start: 3086799

End: 3087089

Strand: Direct

Name: 121609694

Synonym: Veis_2741

Alternate gene names: NA

Gene position: 3086799-3087089 (Clockwise)

Preceding gene: 121609693

Following gene: 121609695

Centisome position: 55.45

GC content: 70.1

Gene sequence:

>291_bases
TTGCCTGATCGCATCCGCATCCATGCCGGCGTGCGCCGGCCCGCGCCCATCGTCATCCATGTCAATGGCGTCGCCACCCC
ATGCCATCCCGGCGAGACGGTGGCAACGGCCCTGCTGGCTGCGGGCATCGTCGTCTTTCGCCGCACCGCGTCAGGCGCGC
CACGGGCGCCGGTCTGCAACATGGGCGTGTGCTTCGACTGTCTGGTGAGCATCGACGGCCGCCCCGCCGTGCGTAGCTGC
ATGACGCGCGTGGCCGCGCAGATGCGCATCGGGCTGCCAGACCATGGCTGA

Upstream 100 bases:

>100_bases
GCCCCGACCTACGCCCGCATCCTGGCCGACAAACTGCTCGGAAAGCCCGATGCTTTCGACCTGCGCGCCTACGACCCTGA
ACGCTTCGCGAGTCTGACCC

Downstream 100 bases:

>100_bases
ACGAGCCGAGTCCGCCGCCGCAGCCGGCGCCCAAGCCCCGGCCTTCGACCTGATCATCGTCGGCGCCGGACCGGCCGGCC
TGTCGGCCGCACTGACGGCC

Product: putative sarcosine oxidase subunit alpha

Products: NA

Alternate protein names: SoxA Protein; Sarcosine Oxidase Subunit Alpha

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPDRIRIHAGVRRPAPIVIHVNGVATPCHPGETVATALLAAGIVVFRRTASGAPRAPVCNMGVCFDCLVSIDGRPAVRSC
MTRVAAQMRIGLPDHG

Sequences:

>Translated_96_residues
MPDRIRIHAGVRRPAPIVIHVNGVATPCHPGETVATALLAAGIVVFRRTASGAPRAPVCNMGVCFDCLVSIDGRPAVRSC
MTRVAAQMRIGLPDHG
>Mature_95_residues
PDRIRIHAGVRRPAPIVIHVNGVATPCHPGETVATALLAAGIVVFRRTASGAPRAPVCNMGVCFDCLVSIDGRPAVRSCM
TRVAAQMRIGLPDHG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10078; Mature: 9947

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDRIRIHAGVRRPAPIVIHVNGVATPCHPGETVATALLAAGIVVFRRTASGAPRAPVCN
CCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
MGVCFDCLVSIDGRPAVRSCMTRVAAQMRIGLPDHG
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PDRIRIHAGVRRPAPIVIHVNGVATPCHPGETVATALLAAGIVVFRRTASGAPRAPVCN
CCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
MGVCFDCLVSIDGRPAVRSCMTRVAAQMRIGLPDHG
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA