| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609645
Identifier: 121609645
GI number: 121609645
Start: 3037252
End: 3037521
Strand: Direct
Name: 121609645
Synonym: Veis_2692
Alternate gene names: NA
Gene position: 3037252-3037521 (Clockwise)
Preceding gene: 121609642
Following gene: 121609647
Centisome position: 54.56
GC content: 56.67
Gene sequence:
>270_bases ATGTCAAACAATCCATCACCAGATATCCCACCGCATCCAGACGAGATCAATGGGCTGGTCCACCACTTCATCGAACGGTA CGACCTCTGGCAGGCAGACGGTTGCGCAGCGGCGCGTGAATATCTGCTGACCTGCTATGCCCGGATCGACGGGCACTACG AGCAACTCAGGGCCTGGGCCGAGCACATGGAACAGGCGCGCCAGCTCGCAGCATCGTTCATGCAATCGTCCGCCTATCAC GACCTGGTGCTTAGAGCATTTTTGATTTAA
Upstream 100 bases:
>100_bases GACTGGAATTTTATTGACGTTTCATGCATTTTAGTAGCCAAAGTGAACCTGTGTCAGGGTACTTTGGCCAAGCAGCACTC CTATATGCTTGGCAACATCG
Downstream 100 bases:
>100_bases GTAGAAACATATCCAGAAGATGAAAAGTAGTTGGACAATTCCTGTGGTGTAAAACAATCAAGCAGGTGCCCGATGGTATT CCAAAGTCCATCGACAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSNNPSPDIPPHPDEINGLVHHFIERYDLWQADGCAAAREYLLTCYARIDGHYEQLRAWAEHMEQARQLAASFMQSSAYH DLVLRAFLI
Sequences:
>Translated_89_residues MSNNPSPDIPPHPDEINGLVHHFIERYDLWQADGCAAAREYLLTCYARIDGHYEQLRAWAEHMEQARQLAASFMQSSAYH DLVLRAFLI >Mature_88_residues SNNPSPDIPPHPDEINGLVHHFIERYDLWQADGCAAAREYLLTCYARIDGHYEQLRAWAEHMEQARQLAASFMQSSAYHD LVLRAFLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10285; Mature: 10153
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNPSPDIPPHPDEINGLVHHFIERYDLWQADGCAAAREYLLTCYARIDGHYEQLRAWA CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH EHMEQARQLAASFMQSSAYHDLVLRAFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SNNPSPDIPPHPDEINGLVHHFIERYDLWQADGCAAAREYLLTCYARIDGHYEQLRAWA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH EHMEQARQLAASFMQSSAYHDLVLRAFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA