| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is thrC [H]
Identifier: 121609618
GI number: 121609618
Start: 3006941
End: 3008491
Strand: Direct
Name: thrC [H]
Synonym: Veis_2664
Alternate gene names: 121609618
Gene position: 3006941-3008491 (Clockwise)
Preceding gene: 121609617
Following gene: 121609619
Centisome position: 54.02
GC content: 67.7
Gene sequence:
>1551_bases ATGAAATACATCAGCACCCGTGGCCAGGCAGGGCGCAGACCGTTTTGCGACATCCTGCTCGAGGGCCTGGCCCCCGACGG CGGCCTGTACCTGCCCGAGCATTACCCGCAGATCGATGACGCAGCCCTGACGCGCTTGCGCCAGGTCTGGCACGAGCAGG GCTACGCCGAACTGGCATACCAGTTGCTGTCGCTGTACATCGACGACATTCCCGCCGCCGACCTGCGGGCGCTGTGCGCC AAGACCTACATCGCCGAAGTCTTCGGCAGCCGCTCCATCGTGCCGCTGCGCCCGCTCGAAGCCGGCCTGTGGCTGCAAGC ACTGTCCAACGGCCCGACGCTGGCCTTCAAGGACCTGGCCATGCAGTTGCTGGGCCATTTGTTCGAGTACGAACTGGCGC GCCGTGGCGAGCAACTGAACATCCTGGGCGCCACCAGCGGCGACACCGGCAGTGCGGCCGAATACGCGCTGCGCGGCAAG ACCGGCGTGCGCGTATTCATGACCAGCCCGGATGGCCGCATGAGCGCCTTCCAGCAGGCGCAGATGTTCAGCCTGCAAGA CGCCAACATCCACAACCTGGCCATCGACGGCGTGTTCGACGACTGCCAGGACATCGTCAAGGCCGTCAGCCGCGACCAGA CCTTCAAGCGCAGGCACCGGATCGGCACCATCAACTCCATCAACTGGGCGCGCCTGCTGGCGCAGGTGGTGTACTACTTT GCCGGCTACCTGCAAGCCAGCGCAAGCAACGCGCAGCAGGTCAGCTTCACGGTGCCCAGCGGCAACTTCGGCAATGTCTG CGCCGGCCATGTGGCGCGCATGATGGGCCTGCCCATCGACCGGCTGGTGGTGGCCACCAACGAGAACGATGTGCTCGACG AATTCTTTCGCACCGGCGTCTACCGCGTGCGCAGCAGCGCCGATACGCGCGCCACCTCCAGCCCCTCGATGGACATCAGC AAAGCCAGCAACTTCGAGCGCTTCGTGTTCGACCTGCTCGGCCGCGACGGCGCGCGCGTCGAGACGCTGTTCGGCCAGAC CCTGGCCACCCGGGGCCGGATCGACCTGAGCGGCGACCCGCGCTTTGCCGAAGCCGCAACGCGCTACGGTTTTGCCAGCG GCAAGAGCACCCATGCCGACCGGCTGGCGACCATCCGCGACAACCACCAGCGCCATCGCGTCACGCTGGACCCCCACACC GCCGACGGGGTGAAGGTGGCGCGCGAGCACTTGGCGCAGAGGGCGCGCGAGCGCCCGGCGCAAGACCCGCCCGCAGCGCC GATGATCGTGCTGGAGACGGCGCTGCCGATCAAGTTCGCCGCGACCATCATCGAAGCCCTGGGCCAGGCGCCCGAGAGAC CCGCGCAGTTCGCCGGCATCGAAAACCTGCCCCGGCGCGTGCAGCGGCTGCCTGCCGATGCGCAACAGGTCAAAGCCTAT ATCGAGCGCCACTGCACGGCGGATGCGGATGCGGGCGCCAAACCGCAGGCGCCGGGCGCCAGCAGCGCCGGGCGCGATGA CTGCCATGCCCCCATGGGGAGCGATGGATGA
Upstream 100 bases:
>100_bases GTCATGGCCCGGATGCAGGCCCTGACGACAGTGCTGGCGCCGATCACACGCCTGCGCAAGGAAGCACTGAACTGAATGCG AATACCGACCGGCTTGCACC
Downstream 100 bases:
>100_bases AAGTCGCAGGTTTTGCCGGCTTTTCCGGCAGTGGCAAAACCACGCTGATCGAGCAACTGATCCCGGCGCTGCGGCGGCAG GGACTGCGCGTGTCGGTGGT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKYISTRGQAGRRPFCDILLEGLAPDGGLYLPEHYPQIDDAALTRLRQVWHEQGYAELAYQLLSLYIDDIPAADLRALCA KTYIAEVFGSRSIVPLRPLEAGLWLQALSNGPTLAFKDLAMQLLGHLFEYELARRGEQLNILGATSGDTGSAAEYALRGK TGVRVFMTSPDGRMSAFQQAQMFSLQDANIHNLAIDGVFDDCQDIVKAVSRDQTFKRRHRIGTINSINWARLLAQVVYYF AGYLQASASNAQQVSFTVPSGNFGNVCAGHVARMMGLPIDRLVVATNENDVLDEFFRTGVYRVRSSADTRATSSPSMDIS KASNFERFVFDLLGRDGARVETLFGQTLATRGRIDLSGDPRFAEAATRYGFASGKSTHADRLATIRDNHQRHRVTLDPHT ADGVKVAREHLAQRARERPAQDPPAAPMIVLETALPIKFAATIIEALGQAPERPAQFAGIENLPRRVQRLPADAQQVKAY IERHCTADADAGAKPQAPGASSAGRDDCHAPMGSDG
Sequences:
>Translated_516_residues MKYISTRGQAGRRPFCDILLEGLAPDGGLYLPEHYPQIDDAALTRLRQVWHEQGYAELAYQLLSLYIDDIPAADLRALCA KTYIAEVFGSRSIVPLRPLEAGLWLQALSNGPTLAFKDLAMQLLGHLFEYELARRGEQLNILGATSGDTGSAAEYALRGK TGVRVFMTSPDGRMSAFQQAQMFSLQDANIHNLAIDGVFDDCQDIVKAVSRDQTFKRRHRIGTINSINWARLLAQVVYYF AGYLQASASNAQQVSFTVPSGNFGNVCAGHVARMMGLPIDRLVVATNENDVLDEFFRTGVYRVRSSADTRATSSPSMDIS KASNFERFVFDLLGRDGARVETLFGQTLATRGRIDLSGDPRFAEAATRYGFASGKSTHADRLATIRDNHQRHRVTLDPHT ADGVKVAREHLAQRARERPAQDPPAAPMIVLETALPIKFAATIIEALGQAPERPAQFAGIENLPRRVQRLPADAQQVKAY IERHCTADADAGAKPQAPGASSAGRDDCHAPMGSDG >Mature_516_residues MKYISTRGQAGRRPFCDILLEGLAPDGGLYLPEHYPQIDDAALTRLRQVWHEQGYAELAYQLLSLYIDDIPAADLRALCA KTYIAEVFGSRSIVPLRPLEAGLWLQALSNGPTLAFKDLAMQLLGHLFEYELARRGEQLNILGATSGDTGSAAEYALRGK TGVRVFMTSPDGRMSAFQQAQMFSLQDANIHNLAIDGVFDDCQDIVKAVSRDQTFKRRHRIGTINSINWARLLAQVVYYF AGYLQASASNAQQVSFTVPSGNFGNVCAGHVARMMGLPIDRLVVATNENDVLDEFFRTGVYRVRSSADTRATSSPSMDIS KASNFERFVFDLLGRDGARVETLFGQTLATRGRIDLSGDPRFAEAATRYGFASGKSTHADRLATIRDNHQRHRVTLDPHT ADGVKVAREHLAQRARERPAQDPPAAPMIVLETALPIKFAATIIEALGQAPERPAQFAGIENLPRRVQRLPADAQQVKAY IERHCTADADAGAKPQAPGASSAGRDDCHAPMGSDG
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI149193323, Length=474, Percent_Identity=31.8565400843882, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI153792148, Length=471, Percent_Identity=33.7579617834395, Blast_Score=207, Evalue=3e-53, Organism=Escherichia coli, GI1786185, Length=485, Percent_Identity=28.2474226804124, Blast_Score=177, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6319901, Length=476, Percent_Identity=41.3865546218487, Blast_Score=328, Evalue=1e-90,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 56472; Mature: 56472
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYISTRGQAGRRPFCDILLEGLAPDGGLYLPEHYPQIDDAALTRLRQVWHEQGYAELAY CCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHH QLLSLYIDDIPAADLRALCAKTYIAEVFGSRSIVPLRPLEAGLWLQALSNGPTLAFKDLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH MQLLGHLFEYELARRGEQLNILGATSGDTGSAAEYALRGKTGVRVFMTSPDGRMSAFQQA HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHH QMFSLQDANIHNLAIDGVFDDCQDIVKAVSRDQTFKRRHRIGTINSINWARLLAQVVYYF HHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH AGYLQASASNAQQVSFTVPSGNFGNVCAGHVARMMGLPIDRLVVATNENDVLDEFFRTGV HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHH YRVRSSADTRATSSPSMDISKASNFERFVFDLLGRDGARVETLFGQTLATRGRIDLSGDP HHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCC RFAEAATRYGFASGKSTHADRLATIRDNHQRHRVTLDPHTADGVKVAREHLAQRARERPA CHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC QDPPAAPMIVLETALPIKFAATIIEALGQAPERPAQFAGIENLPRRVQRLPADAQQVKAY CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHH IERHCTADADAGAKPQAPGASSAGRDDCHAPMGSDG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKYISTRGQAGRRPFCDILLEGLAPDGGLYLPEHYPQIDDAALTRLRQVWHEQGYAELAY CCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHH QLLSLYIDDIPAADLRALCAKTYIAEVFGSRSIVPLRPLEAGLWLQALSNGPTLAFKDLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH MQLLGHLFEYELARRGEQLNILGATSGDTGSAAEYALRGKTGVRVFMTSPDGRMSAFQQA HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHH QMFSLQDANIHNLAIDGVFDDCQDIVKAVSRDQTFKRRHRIGTINSINWARLLAQVVYYF HHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH AGYLQASASNAQQVSFTVPSGNFGNVCAGHVARMMGLPIDRLVVATNENDVLDEFFRTGV HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHH YRVRSSADTRATSSPSMDISKASNFERFVFDLLGRDGARVETLFGQTLATRGRIDLSGDP HHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCC RFAEAATRYGFASGKSTHADRLATIRDNHQRHRVTLDPHTADGVKVAREHLAQRARERPA CHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC QDPPAAPMIVLETALPIKFAATIIEALGQAPERPAQFAGIENLPRRVQRLPADAQQVKAY CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHH IERHCTADADAGAKPQAPGASSAGRDDCHAPMGSDG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2127631; 12948626 [H]