| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609614
Identifier: 121609614
GI number: 121609614
Start: 3002403
End: 3003542
Strand: Direct
Name: 121609614
Synonym: Veis_2660
Alternate gene names: NA
Gene position: 3002403-3003542 (Clockwise)
Preceding gene: 121609613
Following gene: 121609616
Centisome position: 53.93
GC content: 64.65
Gene sequence:
>1140_bases ATGCGCCCGATTCGCCTGCTCTGCCGTGCCGTGCTGCTGCTCGTGGTGTTGTCAGTGGGTTCCATGGCCAGTTCCCAGAT CGTGCTGGGCCAGATCGGTCCTTTCACCGGGCCGCTGGCTGCCGATGCGGCCGGGCTGAACCAGGGCATCAAGGCCTATC TGGCCCAGGCCAACAAGGCCGGGGGCATCAGGGGGCAAAAGCTCACGCTGTTCGAGGCCGATGACCGTTTCAGCGGCGAA GGCTTTGCCGAGCAGTTCCCGAAGGCGATGGAGAAAAAGCCCCTGGCGCTGATCTCGCCGATGGGTTCGGCCGCCATCAA GCGCATGCTCGACGACAAATTGCTCGATACCGCACCGGTGGTGGTGGTCAACGGCGTGCCCGGTGCCGAAAGCCTGCGCA CGCCGGGGCATCCGAAGTTCTTTCACGTCCGGGCCGGCGACAAGCAGGAGATCGAAGAAATCGTCAGCCATGCGCAGATG CTGGGCATGAGCAAATTGGCGACGCTCTACCAAGACCTGCCCACCGGCACCTCGGGCATGGCCGTGGTGCAAGAGGCCGT GAAGACAGTGCCCGGCGGCAAGATCGAACTCAATGGTGTCAAGTCCGGCCCCGATGCTGCGGCGCTGGCGGCTGCCGCCC GGCAGATCGCCGCGCTGGGCGCGCAGGGCGTGCTGGTCATCGGCCCGCCGCCGTTCATCGTCGCCGGCATTGCGGCTTTG CGCAAGGCGGATGTAACGCAGCCGCTCTTTGTGCTCTCTTACGTGTCCGCCGCGCAGATCGTCAAGGTGGTGGGGGTTGC GGGTGCGCGCGGCGTCGGCATTGTGCAGGCCTTTCCCGACCCCAACGACAAGATGCTGCCGGTGCAGCGGGAGTTTCAGG CGGCGATGAAAGAAGCCTTTCCGCAGATGCAGGAATACACGGAGTTTCAGCTCGAAGGCTATCTGTCGGCGCGCACGGTG GGCGAGGCCCTCAAGCACCCGAAGAACACCGGCCTGAGCGCAGCCAACCTGGCGGCCACGCTGTCGACAATGGGCGAAAT CGACATCGGCGGCTTTCACCTGGATTTTTCCAAGGGCAATGCGGGCAGCCGGTATGTGAACATCGGCGTGATCGGCCGCG ACGGGCAGGTGTACTACTGA
Upstream 100 bases:
>100_bases GGCCATGCTAGATTCAAGCCGCCTGAATGTTCGCCAGAACCGCCCGCACAGATAGATGGTAGCGCCCCGGTCAGAGGGGC TTTTTTTGGGGAGGAAGCCG
Downstream 100 bases:
>100_bases TGCGGCTGCGCCCTCTAGTGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCAT CGCTTGCCAATACAGCTCGG
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRPIRLLCRAVLLLVVLSVGSMASSQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKAGGIRGQKLTLFEADDRFSGE GFAEQFPKAMEKKPLALISPMGSAAIKRMLDDKLLDTAPVVVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQM LGMSKLATLYQDLPTGTSGMAVVQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAAL RKADVTQPLFVLSYVSAAQIVKVVGVAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAFPQMQEYTEFQLEGYLSARTV GEALKHPKNTGLSAANLAATLSTMGEIDIGGFHLDFSKGNAGSRYVNIGVIGRDGQVYY
Sequences:
>Translated_379_residues MRPIRLLCRAVLLLVVLSVGSMASSQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKAGGIRGQKLTLFEADDRFSGE GFAEQFPKAMEKKPLALISPMGSAAIKRMLDDKLLDTAPVVVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQM LGMSKLATLYQDLPTGTSGMAVVQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAAL RKADVTQPLFVLSYVSAAQIVKVVGVAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAFPQMQEYTEFQLEGYLSARTV GEALKHPKNTGLSAANLAATLSTMGEIDIGGFHLDFSKGNAGSRYVNIGVIGRDGQVYY >Mature_379_residues MRPIRLLCRAVLLLVVLSVGSMASSQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKAGGIRGQKLTLFEADDRFSGE GFAEQFPKAMEKKPLALISPMGSAAIKRMLDDKLLDTAPVVVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQM LGMSKLATLYQDLPTGTSGMAVVQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAAL RKADVTQPLFVLSYVSAAQIVKVVGVAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAFPQMQEYTEFQLEGYLSARTV GEALKHPKNTGLSAANLAATLSTMGEIDIGGFHLDFSKGNAGSRYVNIGVIGRDGQVYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39688; Mature: 39688
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPIRLLCRAVLLLVVLSVGSMASSQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKA CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GGIRGQKLTLFEADDRFSGEGFAEQFPKAMEKKPLALISPMGSAAIKRMLDDKLLDTAPV CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCE VVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQMLGMSKLATLYQDLPTGTSGM EEEECCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AVVQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAAL HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH RKADVTQPLFVLSYVSAAQIVKVVGVAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAF HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH PQMQEYTEFQLEGYLSARTVGEALKHPKNTGLSAANLAATLSTMGEIDIGGFHLDFSKGN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC AGSRYVNIGVIGRDGQVYY CCCEEEEEEEEECCCCEEC >Mature Secondary Structure MRPIRLLCRAVLLLVVLSVGSMASSQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKA CCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GGIRGQKLTLFEADDRFSGEGFAEQFPKAMEKKPLALISPMGSAAIKRMLDDKLLDTAPV CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCE VVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQMLGMSKLATLYQDLPTGTSGM EEEECCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AVVQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAAL HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH RKADVTQPLFVLSYVSAAQIVKVVGVAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAF HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH PQMQEYTEFQLEGYLSARTVGEALKHPKNTGLSAANLAATLSTMGEIDIGGFHLDFSKGN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC AGSRYVNIGVIGRDGQVYY CCCEEEEEEEEECCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA