| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609613
Identifier: 121609613
GI number: 121609613
Start: 3001881
End: 3002273
Strand: Direct
Name: 121609613
Synonym: Veis_2659
Alternate gene names: NA
Gene position: 3001881-3002273 (Clockwise)
Preceding gene: 121609612
Following gene: 121609614
Centisome position: 53.93
GC content: 72.77
Gene sequence:
>393_bases ATGCAGCCCGATGCCCCGAACGCCGCCGCCGACCCGTGGTGGGCCATCTGCCTGTGCCCGGACTGGTGCGGCGCCTGCCG CGACTACCGATCGTCGTTTGACGCCCTGGCGCGCGCGCATCCCGGCGTGCGCTTCGAATGGGTGGACATCGAGGACGAGG CCGACATCGCCGGCGATCTGGAATTCGAGACCTTCCCCACGCTGCTGATCGGCCATCGCCGCCGCGCCCTTTTCCTGGGC CCGCTGCTGCCGCGGGCGCCGGTGCTGGAGCGGCTGTTGGGCAGTTTGCAGGCCGCGCACCAAGGCGCCGACCAAGGCGG GCATGGCCCGACGCAGGCGGGCGCGCAGGCGCAAGAACTGTTCGATCGCGTGCGCGCGGCGCGGCGCGGCTGA
Upstream 100 bases:
>100_bases CGCTGCCGCGCGGCAATGGCTTTGCTCCTGGTGCGCTGCGGGCTGGGCCCATGGCCTGGCGGCTGACGACCCGGCGTTGC GTTGATGGAAAGCCCGCGCC
Downstream 100 bases:
>100_bases GGTTACAAAACCGTACACCGGCTTTGCGTGGCCATGCTAGATTCAAGCCGCCTGAATGTTCGCCAGAACCGCCCGCACAG ATAGATGGTAGCGCCCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin-Like Protein; Thioredoxin Domain-Containing Protein; Thioredoxin; Thioredoxin Protein; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Domain; Thiol-Disulfide Isomerase And Thioredoxins Family Protein; Thioredoxin-Disulfide Reductase
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MQPDAPNAAADPWWAICLCPDWCGACRDYRSSFDALARAHPGVRFEWVDIEDEADIAGDLEFETFPTLLIGHRRRALFLG PLLPRAPVLERLLGSLQAAHQGADQGGHGPTQAGAQAQELFDRVRAARRG
Sequences:
>Translated_130_residues MQPDAPNAAADPWWAICLCPDWCGACRDYRSSFDALARAHPGVRFEWVDIEDEADIAGDLEFETFPTLLIGHRRRALFLG PLLPRAPVLERLLGSLQAAHQGADQGGHGPTQAGAQAQELFDRVRAARRG >Mature_130_residues MQPDAPNAAADPWWAICLCPDWCGACRDYRSSFDALARAHPGVRFEWVDIEDEADIAGDLEFETFPTLLIGHRRRALFLG PLLPRAPVLERLLGSLQAAHQGADQGGHGPTQAGAQAQELFDRVRAARRG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14259; Mature: 14259
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDAPNAAADPWWAICLCPDWCGACRDYRSSFDALARAHPGVRFEWVDIEDEADIAGDL CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC EFETFPTLLIGHRRRALFLGPLLPRAPVLERLLGSLQAAHQGADQGGHGPTQAGAQAQEL CHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FDRVRAARRG HHHHHHHHCC >Mature Secondary Structure MQPDAPNAAADPWWAICLCPDWCGACRDYRSSFDALARAHPGVRFEWVDIEDEADIAGDL CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC EFETFPTLLIGHRRRALFLGPLLPRAPVLERLLGSLQAAHQGADQGGHGPTQAGAQAQEL CHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH FDRVRAARRG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA