| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609503
Identifier: 121609503
GI number: 121609503
Start: 2877887
End: 2878954
Strand: Direct
Name: 121609503
Synonym: Veis_2547
Alternate gene names: NA
Gene position: 2877887-2878954 (Clockwise)
Preceding gene: 121609502
Following gene: 121609504
Centisome position: 51.7
GC content: 61.8
Gene sequence:
>1068_bases ATGCTGACTTCATTCGGACGATATCGGCTCAGCTACGCTGTCAGCCTCTTCCTCGCTATCTCCATCCTCGGCGCCTTGCT AATGTTCGGGTTCGCCAGGAATGCCGGGTACACCCAGACTGATCTGACGTTCGCCATGACGATGATCATCTGCGGCGTAA CGTATGCCACCGTCCGCGATGCGGCGGGAGCATTCGCCTATGCGGTGGAGTCGTCGAAGTTCTACCGGGACGAAGCGGAC TTCGCGTTGCTGAAGTCCTATGCCTGCGGCTGGCGACGGGTGGCTGCCCTATTGGCCAGACCGATGCCGTCGACCCTCCT GATTGCCGCGTCATTCCTCGGCCTGCAATTCCTGGCCACCCGGCGGCTGGCGGCAGATTCGGAGCCGAACCTGCAAGCCG CAGTCCTCTTTGTCGCCGTCCTCTTTCCATTCGCGCTGTCCTTGCTGGTTCATTTCCTTTCACCCGTGTTCGTCGGGTGG AAGGATTTGGACATGCGCAAGATGCCACCCATGCCCCAGGGCGAGGGCTCAGTGGCCAAGCTCATGCGCAAGATCGCCGT GGCGGACTTGCTCATCACCATGCTGATCAATGTGGCGCTCGTAATGCCCGTCCGCCACAACCCTGATTTCCATCCGTCAC TCGGGTATGGCTCCGTGGAGTTCGTGGCGGCCGCGCTCATCCTGGCCATGATAGTCGGCACGCTGTCTCTGCTGAGTGCC TGGCGGACGCGCGTCTATGCCTGCTCGGGCGACCTGTACCGGTTGCGGGCCATCGACTTGACATGGACGCCCCTCTCCCA AGTCACCGGTAACCGGTGGGTGCGCTGGGTCCGCTACAGCCTCTTGATTGGCGGCTTCACCATCGTGGCGTGCCTCCTGT TGGGTGCGCTGTACGAGACGGCACCCATCCAGATCGTGCTGGTGCTCCTGCTGCTTCCGGTGGCGATTATGTTCCGGGTC GAGCGCAACGCCGTGCTGACCTCGAACTTCCGTGACGCCTCGCAACTCGTCGCTGAATTCCCTGCGCGCATGCCGATTTC TGAGCGGATCGATCTGGTCAGGCCATAG
Upstream 100 bases:
>100_bases GCGGCAGCCTGGGCTCCCAGGCGCAGACTACCCATTGCAGCCAGATGCTGAGGAGCTTGCCCAGTCACCTGCCCGCGCCA CGCTTGCAAGAGGCCCCCGC
Downstream 100 bases:
>100_bases TGATGCATATCGGAATCGACATAGTCGAAGTGCCGCGGATTGCGAAGGCGCTGAACCGGGGTGACAAGGGCTTTCTGAAC GCGGTCTACACGGCCGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLTSFGRYRLSYAVSLFLAISILGALLMFGFARNAGYTQTDLTFAMTMIICGVTYATVRDAAGAFAYAVESSKFYRDEAD FALLKSYACGWRRVAALLARPMPSTLLIAASFLGLQFLATRRLAADSEPNLQAAVLFVAVLFPFALSLLVHFLSPVFVGW KDLDMRKMPPMPQGEGSVAKLMRKIAVADLLITMLINVALVMPVRHNPDFHPSLGYGSVEFVAAALILAMIVGTLSLLSA WRTRVYACSGDLYRLRAIDLTWTPLSQVTGNRWVRWVRYSLLIGGFTIVACLLLGALYETAPIQIVLVLLLLPVAIMFRV ERNAVLTSNFRDASQLVAEFPARMPISERIDLVRP
Sequences:
>Translated_355_residues MLTSFGRYRLSYAVSLFLAISILGALLMFGFARNAGYTQTDLTFAMTMIICGVTYATVRDAAGAFAYAVESSKFYRDEAD FALLKSYACGWRRVAALLARPMPSTLLIAASFLGLQFLATRRLAADSEPNLQAAVLFVAVLFPFALSLLVHFLSPVFVGW KDLDMRKMPPMPQGEGSVAKLMRKIAVADLLITMLINVALVMPVRHNPDFHPSLGYGSVEFVAAALILAMIVGTLSLLSA WRTRVYACSGDLYRLRAIDLTWTPLSQVTGNRWVRWVRYSLLIGGFTIVACLLLGALYETAPIQIVLVLLLLPVAIMFRV ERNAVLTSNFRDASQLVAEFPARMPISERIDLVRP >Mature_355_residues MLTSFGRYRLSYAVSLFLAISILGALLMFGFARNAGYTQTDLTFAMTMIICGVTYATVRDAAGAFAYAVESSKFYRDEAD FALLKSYACGWRRVAALLARPMPSTLLIAASFLGLQFLATRRLAADSEPNLQAAVLFVAVLFPFALSLLVHFLSPVFVGW KDLDMRKMPPMPQGEGSVAKLMRKIAVADLLITMLINVALVMPVRHNPDFHPSLGYGSVEFVAAALILAMIVGTLSLLSA WRTRVYACSGDLYRLRAIDLTWTPLSQVTGNRWVRWVRYSLLIGGFTIVACLLLGALYETAPIQIVLVLLLLPVAIMFRV ERNAVLTSNFRDASQLVAEFPARMPISERIDLVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39190; Mature: 39190
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSFGRYRLSYAVSLFLAISILGALLMFGFARNAGYTQTDLTFAMTMIICGVTYATVRD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAGAFAYAVESSKFYRDEADFALLKSYACGWRRVAALLARPMPSTLLIAASFLGLQFLAT HHHHHHHHHHCHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RRLAADSEPNLQAAVLFVAVLFPFALSLLVHFLSPVFVGWKDLDMRKMPPMPQGEGSVAK HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH LMRKIAVADLLITMLINVALVMPVRHNPDFHPSLGYGSVEFVAAALILAMIVGTLSLLSA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WRTRVYACSGDLYRLRAIDLTWTPLSQVTGNRWVRWVRYSLLIGGFTIVACLLLGALYET HHHHHEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APIQIVLVLLLLPVAIMFRVERNAVLTSNFRDASQLVAEFPARMPISERIDLVRP CHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCHHHCCCCCCC >Mature Secondary Structure MLTSFGRYRLSYAVSLFLAISILGALLMFGFARNAGYTQTDLTFAMTMIICGVTYATVRD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAGAFAYAVESSKFYRDEADFALLKSYACGWRRVAALLARPMPSTLLIAASFLGLQFLAT HHHHHHHHHHCHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RRLAADSEPNLQAAVLFVAVLFPFALSLLVHFLSPVFVGWKDLDMRKMPPMPQGEGSVAK HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH LMRKIAVADLLITMLINVALVMPVRHNPDFHPSLGYGSVEFVAAALILAMIVGTLSLLSA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WRTRVYACSGDLYRLRAIDLTWTPLSQVTGNRWVRWVRYSLLIGGFTIVACLLLGALYET HHHHHEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APIQIVLVLLLLPVAIMFRVERNAVLTSNFRDASQLVAEFPARMPISERIDLVRP CHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA