| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is baeC [H]
Identifier: 121609502
GI number: 121609502
Start: 2876946
End: 2877893
Strand: Direct
Name: baeC [H]
Synonym: Veis_2546
Alternate gene names: 121609502
Gene position: 2876946-2877893 (Clockwise)
Preceding gene: 121609501
Following gene: 121609503
Centisome position: 51.68
GC content: 64.14
Gene sequence:
>948_bases ATGTTCACTGGCCAAGGGGCCCAGCGGGTCGGGATGGGTTCGGACGTGGATGAAGCAGCGAAAAGCAAGGCGGTCTGGGA CTGTGCTTGCGACATCTCCGGGTTCGACGTCCGCCGCATGTGCTGGAAAGGCCCGATGGGCAAGCTCTCGGAGACCCGGT ACCAGCAAGTCGCGGTGACCGCAGTCAACCTCGCGAGCTACTACGCACTGAAGGCTTCACGCCTGCTGCCGGAGGACTCG GTCTTCATCGGCCACAGCGTCGGCGAGTACTCGGCACTACACGCAAGCGGGGCGCTCGACTTGGAGCAGACCTTCAAGGC CGTGAACGCACGCGCGATCGGCATGCAGACGCAGGCCGAGCAGACCAAGGGGGCGATGTATGCGGTCAAGGGCGGCTCGA TCGTTCAGGTCAACGACGTCATCGACGCTATGGGGTTGCACGGGCAAGTAGTGATCGCCAATGACAACTCGCCACTCCAA GTGGTCATCGCGGGCAACTCGGGCATTGTGAAGCAGGTGGGCGCGGAGCTCTCGGGGCGTCGCCTCCCGACAGTCAGGCT CGCGGTGAATGGCGCCTGGCATAGCCCGCTGATGGCCGGGATGCTGCCGGAATACGGCAGCCTGCTGAGGAGCCTGGACA TCAGGATGCCTTCGTCGCAGATTCTTATGAACCGCTCGGCGCAGGAGCCGCTGTCCCCGCAAGAGATCCGGGACAACCTG ACTTACCATGTCGTGGAGACGGTCCGGTGGCGGGAGACCGTCGAGAAACTGCTTCAGCGCAACAAGGCCCGCTTCCTGGA GGTGGGGCCGCGCAAGGTGCTTTGCGCGCTAGTGTCAGATTGCGGCAGCCTGGGCTCCCAGGCGCAGACTACCCATTGCA GCCAGATGCTGAGGAGCTTGCCCAGTCACCTGCCCGCGCCACGCTTGCAAGAGGCCCCCGCATGCTGA
Upstream 100 bases:
>100_bases ACGCAGTGAATTCGGACGGTTCGGGCAGTCGCCCTTGCTATATTTCGGGCTGAAATTCTCTCTATGAACAAGGGAGGCAC TTGTGGATTCATGGGTTGTG
Downstream 100 bases:
>100_bases CTTCATTCGGACGATATCGGCTCAGCTACGCTGTCAGCCTCTTCCTCGCTATCTCCATCCTCGGCGCCTTGCTAATGTTC GGGTTCGCCAGGAATGCCGG
Product: acyl transferase domain-containing protein
Products: NA
Alternate protein names: AT [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MFTGQGAQRVGMGSDVDEAAKSKAVWDCACDISGFDVRRMCWKGPMGKLSETRYQQVAVTAVNLASYYALKASRLLPEDS VFIGHSVGEYSALHASGALDLEQTFKAVNARAIGMQTQAEQTKGAMYAVKGGSIVQVNDVIDAMGLHGQVVIANDNSPLQ VVIAGNSGIVKQVGAELSGRRLPTVRLAVNGAWHSPLMAGMLPEYGSLLRSLDIRMPSSQILMNRSAQEPLSPQEIRDNL TYHVVETVRWRETVEKLLQRNKARFLEVGPRKVLCALVSDCGSLGSQAQTTHCSQMLRSLPSHLPAPRLQEAPAC
Sequences:
>Translated_315_residues MFTGQGAQRVGMGSDVDEAAKSKAVWDCACDISGFDVRRMCWKGPMGKLSETRYQQVAVTAVNLASYYALKASRLLPEDS VFIGHSVGEYSALHASGALDLEQTFKAVNARAIGMQTQAEQTKGAMYAVKGGSIVQVNDVIDAMGLHGQVVIANDNSPLQ VVIAGNSGIVKQVGAELSGRRLPTVRLAVNGAWHSPLMAGMLPEYGSLLRSLDIRMPSSQILMNRSAQEPLSPQEIRDNL TYHVVETVRWRETVEKLLQRNKARFLEVGPRKVLCALVSDCGSLGSQAQTTHCSQMLRSLPSHLPAPRLQEAPAC >Mature_315_residues MFTGQGAQRVGMGSDVDEAAKSKAVWDCACDISGFDVRRMCWKGPMGKLSETRYQQVAVTAVNLASYYALKASRLLPEDS VFIGHSVGEYSALHASGALDLEQTFKAVNARAIGMQTQAEQTKGAMYAVKGGSIVQVNDVIDAMGLHGQVVIANDNSPLQ VVIAGNSGIVKQVGAELSGRRLPTVRLAVNGAWHSPLMAGMLPEYGSLLRSLDIRMPSSQILMNRSAQEPLSPQEIRDNL TYHVVETVRWRETVEKLLQRNKARFLEVGPRKVLCALVSDCGSLGSQAQTTHCSQMLRSLPSHLPAPRLQEAPAC
Specific function: Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. It catalyzes the transfer of the malonyl-CoA group to the acyl-carrier-protein AcpK (Mal-AcpK) [H]
COG id: COG0331
COG function: function code I; (acyl-carrier-protein) S-malonyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabD family [H]
Homologues:
Organism=Homo sapiens, GI51243059, Length=300, Percent_Identity=28.3333333333333, Blast_Score=102, Evalue=3e-22, Organism=Escherichia coli, GI1787334, Length=282, Percent_Identity=29.4326241134752, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71984332, Length=297, Percent_Identity=27.9461279461279, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24665753, Length=305, Percent_Identity=26.5573770491803, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR004410 - InterPro: IPR016036 [H]
Pfam domain/function: PF00698 Acyl_transf_1 [H]
EC number: =2.3.1.39 [H]
Molecular weight: Translated: 34077; Mature: 34077
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTGQGAQRVGMGSDVDEAAKSKAVWDCACDISGFDVRRMCWKGPMGKLSETRYQQVAVT CCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH AVNLASYYALKASRLLPEDSVFIGHSVGEYSALHASGALDLEQTFKAVNARAIGMQTQAE HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH QTKGAMYAVKGGSIVQVNDVIDAMGLHGQVVIANDNSPLQVVIAGNSGIVKQVGAELSGR HHCCCEEEECCCCEEEHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCC RLPTVRLAVNGAWHSPLMAGMLPEYGSLLRSLDIRMPSSQILMNRSAQEPLSPQEIRDNL CCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHCCC TYHVVETVRWRETVEKLLQRNKARFLEVGPRKVLCALVSDCGSLGSQAQTTHCSQMLRSL HHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PSHLPAPRLQEAPAC HHHCCCCCCCCCCCC >Mature Secondary Structure MFTGQGAQRVGMGSDVDEAAKSKAVWDCACDISGFDVRRMCWKGPMGKLSETRYQQVAVT CCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH AVNLASYYALKASRLLPEDSVFIGHSVGEYSALHASGALDLEQTFKAVNARAIGMQTQAE HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH QTKGAMYAVKGGSIVQVNDVIDAMGLHGQVVIANDNSPLQVVIAGNSGIVKQVGAELSGR HHCCCEEEECCCCEEEHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHCCC RLPTVRLAVNGAWHSPLMAGMLPEYGSLLRSLDIRMPSSQILMNRSAQEPLSPQEIRDNL CCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHCCC TYHVVETVRWRETVEKLLQRNKARFLEVGPRKVLCALVSDCGSLGSQAQTTHCSQMLRSL HHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PSHLPAPRLQEAPAC HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA