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The map label for this gene is lolC [H]

Identifier: 121609498

GI number: 121609498

Start: 2872397

End: 2873722

Strand: Direct

Name: lolC [H]

Synonym: Veis_2542

Alternate gene names: 121609498

Gene position: 2872397-2873722 (Clockwise)

Preceding gene: 121609497

Following gene: 121609499

Centisome position: 51.6

GC content: 61.31

Gene sequence:

>1326_bases
ATGAACCACCTGCTCGCCTGGCTGGCCAACCTCATCGCCGTCTACGCCCTGATCCTCATCGGGTGGACAATCGTTCGCCG
ACCGACTGACCTGGCCTACGCCTTTTCCAATCTGTTCCGGCAAAAGCGTCGTTCGCTGGTCACGCTGAGCTCCATCGTAC
TGGGCGGCGTGGCAATCTTCCTGTTCGGCGGGTTCGTCGACTACTCGTTCTGGTCCTTGCGGGAGCAGACGATCCGCACG
AACCTGGGCCATGTCCAGATCTACAAGAAGGGCTACCTGGCCAGCGGCGAGGCAACGCCGCTGAAATACGGGATCGCTGA
CTACGAAGGGATCCGCCGGATGTTGGTGGAGGACCCGATTCTGCAACCCCTGATCAAGACCGTCACCGGCCAGCTCGCGT
TCTCCGGGATAGTCTCGAACTACGACAGTGGCGTTTCCACCTTCTACACGGCCGTGGGAATCGAGCCAGAAAGCTCCTTG
CTGCTGGGCTCACTGGATCGTATCGTCTTGGGCAGCGACCTGTCCCGCGTCGACGACACGGGAGCGACGATCGGCGCTGG
TTTGGCACGCGGGCTTGCCGTCAGCTACGACAGCCAGATCGACATGCTCGCCATCAACCCTGCGGGCGGCCAGAACGCGA
TGTCTGCCCATGTGCGTGGCGTCATGGAGTCGGGCATCAAGGACTACGACGACCGGGTTCTGAAAATGCCGCTCAAGACG
GCCCAAACCCTACTGGAAACCAAAGAGGTGAGCAAGATCATTGTCCTGCTGAACGAGACCGACCGGACGGCGCAGGCGCA
GGCGCGGATCGAGCGGGTGATCGAGGAGCGGGGGTTGCAGCTCGAGACGAGGCCGTGGAGCTCGCTCGCGGTCTTCTATG
ACCAGGTGGTCAACCTGTTCAATGGAATCTTCTTCTTCATCAAAACCATCGTCAGCACGATCGTGGTCTTCATGATCAGC
AACACTATGATGATGAACGTCCTGGAGCGGACGCGGGAAATTGGCACGCTGCGGGCCATCGGGCTGACGGAGCGGGAGGT
GTCCCGCCTTTTCCTGCTGGAGGGCGTGATCATGGGCTTCGTCGGAGCCGTCCTCAGCATTGCCGTGGGCATCGCACTGG
CGGAGCTCATCAACATCAACGGCGTGCCTATGCCGCCTTCGCCGGGCTACTCGCGCGGTTACCTCGCCTTCATTCGCTGG
ACCGACGACTGGTCGCTGTTCTGGTTCAGCTCTGTCCTGGCCATCGTCACTGCCTTCGCGGCGTCGATCCTTCCCGCGCG
AAGGGCCTCCAAGTTGGTGATCGCGCAAGCCTTTCGCCACAGCTAA

Upstream 100 bases:

>100_bases
GAACGCAGATGGCCGCCCTTTCGAGTCCCTGCGGCCTACAGACCTTTGTCGCGGACGAAGAGATCGACGCCTTGCTCAAC
TACGCGCTGAGGCACAACAA

Downstream 100 bases:

>100_bases
GCGTCAAGGATCATTTGTTCTTTCATCACGATGGAAAGTAAGAATCAAGTTGTCTTCATCACGGGTTCGGGCCGTGGCAT
CGGCGAGGCCGTCGCCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MNHLLAWLANLIAVYALILIGWTIVRRPTDLAYAFSNLFRQKRRSLVTLSSIVLGGVAIFLFGGFVDYSFWSLREQTIRT
NLGHVQIYKKGYLASGEATPLKYGIADYEGIRRMLVEDPILQPLIKTVTGQLAFSGIVSNYDSGVSTFYTAVGIEPESSL
LLGSLDRIVLGSDLSRVDDTGATIGAGLARGLAVSYDSQIDMLAINPAGGQNAMSAHVRGVMESGIKDYDDRVLKMPLKT
AQTLLETKEVSKIIVLLNETDRTAQAQARIERVIEERGLQLETRPWSSLAVFYDQVVNLFNGIFFFIKTIVSTIVVFMIS
NTMMMNVLERTREIGTLRAIGLTEREVSRLFLLEGVIMGFVGAVLSIAVGIALAELININGVPMPPSPGYSRGYLAFIRW
TDDWSLFWFSSVLAIVTAFAASILPARRASKLVIAQAFRHS

Sequences:

>Translated_441_residues
MNHLLAWLANLIAVYALILIGWTIVRRPTDLAYAFSNLFRQKRRSLVTLSSIVLGGVAIFLFGGFVDYSFWSLREQTIRT
NLGHVQIYKKGYLASGEATPLKYGIADYEGIRRMLVEDPILQPLIKTVTGQLAFSGIVSNYDSGVSTFYTAVGIEPESSL
LLGSLDRIVLGSDLSRVDDTGATIGAGLARGLAVSYDSQIDMLAINPAGGQNAMSAHVRGVMESGIKDYDDRVLKMPLKT
AQTLLETKEVSKIIVLLNETDRTAQAQARIERVIEERGLQLETRPWSSLAVFYDQVVNLFNGIFFFIKTIVSTIVVFMIS
NTMMMNVLERTREIGTLRAIGLTEREVSRLFLLEGVIMGFVGAVLSIAVGIALAELININGVPMPPSPGYSRGYLAFIRW
TDDWSLFWFSSVLAIVTAFAASILPARRASKLVIAQAFRHS
>Mature_441_residues
MNHLLAWLANLIAVYALILIGWTIVRRPTDLAYAFSNLFRQKRRSLVTLSSIVLGGVAIFLFGGFVDYSFWSLREQTIRT
NLGHVQIYKKGYLASGEATPLKYGIADYEGIRRMLVEDPILQPLIKTVTGQLAFSGIVSNYDSGVSTFYTAVGIEPESSL
LLGSLDRIVLGSDLSRVDDTGATIGAGLARGLAVSYDSQIDMLAINPAGGQNAMSAHVRGVMESGIKDYDDRVLKMPLKT
AQTLLETKEVSKIIVLLNETDRTAQAQARIERVIEERGLQLETRPWSSLAVFYDQVVNLFNGIFFFIKTIVSTIVVFMIS
NTMMMNVLERTREIGTLRAIGLTEREVSRLFLLEGVIMGFVGAVLSIAVGIALAELININGVPMPPSPGYSRGYLAFIRW
TDDWSLFWFSSVLAIVTAFAASILPARRASKLVIAQAFRHS

Specific function: Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838
- InterPro:   IPR011925 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 48591; Mature: 48591

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLLAWLANLIAVYALILIGWTIVRRPTDLAYAFSNLFRQKRRSLVTLSSIVLGGVAIF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGGFVDYSFWSLREQTIRTNLGHVQIYKKGYLASGEATPLKYGIADYEGIRRMLVEDPI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHCHH
LQPLIKTVTGQLAFSGIVSNYDSGVSTFYTAVGIEPESSLLLGSLDRIVLGSDLSRVDDT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCC
GATIGAGLARGLAVSYDSQIDMLAINPAGGQNAMSAHVRGVMESGIKDYDDRVLKMPLKT
CCHHHHHHHHCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQTLLETKEVSKIIVLLNETDRTAQAQARIERVIEERGLQLETRPWSSLAVFYDQVVNLF
HHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHH
NGIFFFIKTIVSTIVVFMISNTMMMNVLERTREIGTLRAIGLTEREVSRLFLLEGVIMGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH
VGAVLSIAVGIALAELININGVPMPPSPGYSRGYLAFIRWTDDWSLFWFSSVLAIVTAFA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
ASILPARRASKLVIAQAFRHS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNHLLAWLANLIAVYALILIGWTIVRRPTDLAYAFSNLFRQKRRSLVTLSSIVLGGVAIF
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGGFVDYSFWSLREQTIRTNLGHVQIYKKGYLASGEATPLKYGIADYEGIRRMLVEDPI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHCHH
LQPLIKTVTGQLAFSGIVSNYDSGVSTFYTAVGIEPESSLLLGSLDRIVLGSDLSRVDDT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCC
GATIGAGLARGLAVSYDSQIDMLAINPAGGQNAMSAHVRGVMESGIKDYDDRVLKMPLKT
CCHHHHHHHHCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQTLLETKEVSKIIVLLNETDRTAQAQARIERVIEERGLQLETRPWSSLAVFYDQVVNLF
HHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHH
NGIFFFIKTIVSTIVVFMISNTMMMNVLERTREIGTLRAIGLTEREVSRLFLLEGVIMGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHH
VGAVLSIAVGIALAELININGVPMPPSPGYSRGYLAFIRWTDDWSLFWFSSVLAIVTAFA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
ASILPARRASKLVIAQAFRHS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]