Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609497

Identifier: 121609497

GI number: 121609497

Start: 2871651

End: 2872400

Strand: Direct

Name: 121609497

Synonym: Veis_2541

Alternate gene names: NA

Gene position: 2871651-2872400 (Clockwise)

Preceding gene: 121609496

Following gene: 121609498

Centisome position: 51.59

GC content: 59.6

Gene sequence:

>750_bases
ATGATAGCAAGTAGGCTCATGCTGGTTCCGGTGTGGTTCAGCTTCTCGCTGGCGACTCAGGCGAGTTGTCTGCAATCCGA
CCCTGCGCAGGTATCTGCCATGGCGCAGAAGAGCAAGGCCGCGATCAACACCCTCTACGAACATGAGAAAGCGAGGATCG
GCGGCCAGCCCAGCCGCTCTCTCGTCCTGCTGGCGGTTCATCTGGCGTCCGAAGGCAAGCTGGACGCGCGGTCTGTCGAA
TACTTGAGCCGCTACGTGCAAGACCAGCCGGACGACCATTTCGCCAAGCTGTACGAAGGCTATGCCTGGGTGTTCAGTGC
AGCGAAGTACGACAAAGAGAAAAACTACCTGCGTGCTGCCGAGTACCTCAAACGCGGTTTCTTCCTGATCGATGAGGCCG
TCGATTCTGATCCGAAGAACTGGCGACTGCGTTACCTGCGGATGCGGATGGACGCCTTCGTTCCTTCGGAACTGGGAAGG
TACGTGGTCGCATTGAAGGACGCTTCCCTCCTGACGGAGAACATCGACCAACTGCCCGCAGGGCTGCGGCCGTTCGTGTC
CGTGCTGAGGTTGTCGGCCCTGGACAGGTCGGGCAAAACGGCTGTCGCTGCGAGCGACTACGCAGTCGTGCGCAAGCAGT
TCCAGGGAACGCAGATGGCCGCCCTTTCGAGTCCCTGCGGCCTACAGACCTTTGTCGCGGACGAAGAGATCGACGCCTTG
CTCAACTACGCGCTGAGGCACAACAAATGA

Upstream 100 bases:

>100_bases
AACGCCGAGAGCAGCACCACCTTGCTGGTGTCCACCCATTCGGAATTCGTGAAAGACCGTGCATCGCGTGTCGTCGAGCT
CAAGGACGGGAGAGTGATTC

Downstream 100 bases:

>100_bases
ACCACCTGCTCGCCTGGCTGGCCAACCTCATCGCCGTCTACGCCCTGATCCTCATCGGGTGGACAATCGTTCGCCGACCG
ACTGACCTGGCCTACGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MIASRLMLVPVWFSFSLATQASCLQSDPAQVSAMAQKSKAAINTLYEHEKARIGGQPSRSLVLLAVHLASEGKLDARSVE
YLSRYVQDQPDDHFAKLYEGYAWVFSAAKYDKEKNYLRAAEYLKRGFFLIDEAVDSDPKNWRLRYLRMRMDAFVPSELGR
YVVALKDASLLTENIDQLPAGLRPFVSVLRLSALDRSGKTAVAASDYAVVRKQFQGTQMAALSSPCGLQTFVADEEIDAL
LNYALRHNK

Sequences:

>Translated_249_residues
MIASRLMLVPVWFSFSLATQASCLQSDPAQVSAMAQKSKAAINTLYEHEKARIGGQPSRSLVLLAVHLASEGKLDARSVE
YLSRYVQDQPDDHFAKLYEGYAWVFSAAKYDKEKNYLRAAEYLKRGFFLIDEAVDSDPKNWRLRYLRMRMDAFVPSELGR
YVVALKDASLLTENIDQLPAGLRPFVSVLRLSALDRSGKTAVAASDYAVVRKQFQGTQMAALSSPCGLQTFVADEEIDAL
LNYALRHNK
>Mature_249_residues
MIASRLMLVPVWFSFSLATQASCLQSDPAQVSAMAQKSKAAINTLYEHEKARIGGQPSRSLVLLAVHLASEGKLDARSVE
YLSRYVQDQPDDHFAKLYEGYAWVFSAAKYDKEKNYLRAAEYLKRGFFLIDEAVDSDPKNWRLRYLRMRMDAFVPSELGR
YVVALKDASLLTENIDQLPAGLRPFVSVLRLSALDRSGKTAVAASDYAVVRKQFQGTQMAALSSPCGLQTFVADEEIDAL
LNYALRHNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27895; Mature: 27895

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASRLMLVPVWFSFSLATQASCLQSDPAQVSAMAQKSKAAINTLYEHEKARIGGQPSRS
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LVLLAVHLASEGKLDARSVEYLSRYVQDQPDDHFAKLYEGYAWVFSAAKYDKEKNYLRAA
EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYLKRGFFLIDEAVDSDPKNWRLRYLRMRMDAFVPSELGRYVVALKDASLLTENIDQLPA
HHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEECHHHHHHHHHHHCCC
GLRPFVSVLRLSALDRSGKTAVAASDYAVVRKQFQGTQMAALSSPCGLQTFVADEEIDAL
CHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
LNYALRHNK
HHHHHHCCC
>Mature Secondary Structure
MIASRLMLVPVWFSFSLATQASCLQSDPAQVSAMAQKSKAAINTLYEHEKARIGGQPSRS
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LVLLAVHLASEGKLDARSVEYLSRYVQDQPDDHFAKLYEGYAWVFSAAKYDKEKNYLRAA
EEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYLKRGFFLIDEAVDSDPKNWRLRYLRMRMDAFVPSELGRYVVALKDASLLTENIDQLPA
HHHHHCCEEEEHHHCCCCCHHHHHHHHHHHHHCCHHHHCCEEEEECHHHHHHHHHHHCCC
GLRPFVSVLRLSALDRSGKTAVAASDYAVVRKQFQGTQMAALSSPCGLQTFVADEEIDAL
CHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
LNYALRHNK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA