| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609458
Identifier: 121609458
GI number: 121609458
Start: 2834683
End: 2835684
Strand: Direct
Name: 121609458
Synonym: Veis_2502
Alternate gene names: NA
Gene position: 2834683-2835684 (Clockwise)
Preceding gene: 121609457
Following gene: 121609459
Centisome position: 50.92
GC content: 70.26
Gene sequence:
>1002_bases ATGAGCACCCCCGCCACCAAAGGCCACGCCATGCAGCGCAGAACAGTTCTTCTGGCCGCCGCCGTCGCCGCAGCCACCCA CGACGGCGCGCACGCGCAGCAGCCCTGGCCGGGAAAGCCGATACGGCTGATCGTCGGCTATGCGCCCGGCGGCTCGGCGG ACATCGCGGCGCGGCTGATCGCGGACAAATTGCGCGCCGAACTCGGGCAGCCGGTGGTGGTGGAGAACAAAACCGGCGCC GGCGGCAACATCGGCACCGAAGCGGTGGTGCGCGCCGCGCCGGACGGCCACACCCTTTTGCTGGCGGCGGCGGCGCAGAT CGTCATCAATCCAAGCCTGTACAAGGGCATGTCCTTCGATCCGCTCAAGGAACTGGCGCCCGTCACCCGACTGCAGACCG AACACAACCTGATGGTGCTGGGCGCGCAGGTGCCGGCCAAGGATTTGCAGGCATTCATCGCCTATGCCAAGGCCCATCCC CAAGGCGTCACCTTTGCCTCGCCCGGCGCCGGCTCGCCGTCGCACCTGGCCGGCGCGCTGCTGAACCAGATGGCCGGCTT GACGATGCAGCATGTGCCCTACAAAGGCTCGGCCCTGGCGCTCAACGACCTGCTGGCCGGCCATGTGAGCATGAGCATCG ACAACATGCCGGCCTTGCTGCCGCAGGTCAGGAGCGGCAGGCTGCGCGCCATTGCCGTGGCCAGCACCCGCCGCGCAGCG GCGGCGCCGGACATCCCGACCATGCAGGAAGCCGGCCTTGCGGGCTACGACGTGAGCGCCTGGAAGGGCCTGATGGCGCC AGCCGCCACGCCGGCGGCAATCATCGGGCGCCTGCATGCGGCCGCCGTCAAGGCGCTGGCCGACCCCGACATCCGCAGCC GCATGGTCGCCATGGGCGCCGAGCCGGTGGGCGACAGGCCCGAGCATTTCGGCCAGACGCTGCGCGCGGAGTCGGCGCGC TGGGCCGCGCTGGTGAAAAGCACCGGCGCCACGCTGGAATGA
Upstream 100 bases:
>100_bases TGCAGGCGGTGGGCAGCAGCGCGGCCGAGTTCGCGGCACATATCCGCGCCGAAACCGACAAGTGGCGGCGCGTCGTCACG GACGCCCGCATCCAGACGCA
Downstream 100 bases:
>100_bases GCGCATGGATGCCGCCGCCGCAGCGAACATCTTCGGCCACAGCCCGGGCCTGCCCGCCTTGCGCGCGCGGGTGCGGCGCT TCGTCGACGAGCAACTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSTPATKGHAMQRRTVLLAAAVAAATHDGAHAQQPWPGKPIRLIVGYAPGGSADIAARLIADKLRAELGQPVVVENKTGA GGNIGTEAVVRAAPDGHTLLLAAAAQIVINPSLYKGMSFDPLKELAPVTRLQTEHNLMVLGAQVPAKDLQAFIAYAKAHP QGVTFASPGAGSPSHLAGALLNQMAGLTMQHVPYKGSALALNDLLAGHVSMSIDNMPALLPQVRSGRLRAIAVASTRRAA AAPDIPTMQEAGLAGYDVSAWKGLMAPAATPAAIIGRLHAAAVKALADPDIRSRMVAMGAEPVGDRPEHFGQTLRAESAR WAALVKSTGATLE
Sequences:
>Translated_333_residues MSTPATKGHAMQRRTVLLAAAVAAATHDGAHAQQPWPGKPIRLIVGYAPGGSADIAARLIADKLRAELGQPVVVENKTGA GGNIGTEAVVRAAPDGHTLLLAAAAQIVINPSLYKGMSFDPLKELAPVTRLQTEHNLMVLGAQVPAKDLQAFIAYAKAHP QGVTFASPGAGSPSHLAGALLNQMAGLTMQHVPYKGSALALNDLLAGHVSMSIDNMPALLPQVRSGRLRAIAVASTRRAA AAPDIPTMQEAGLAGYDVSAWKGLMAPAATPAAIIGRLHAAAVKALADPDIRSRMVAMGAEPVGDRPEHFGQTLRAESAR WAALVKSTGATLE >Mature_332_residues STPATKGHAMQRRTVLLAAAVAAATHDGAHAQQPWPGKPIRLIVGYAPGGSADIAARLIADKLRAELGQPVVVENKTGAG GNIGTEAVVRAAPDGHTLLLAAAAQIVINPSLYKGMSFDPLKELAPVTRLQTEHNLMVLGAQVPAKDLQAFIAYAKAHPQ GVTFASPGAGSPSHLAGALLNQMAGLTMQHVPYKGSALALNDLLAGHVSMSIDNMPALLPQVRSGRLRAIAVASTRRAAA APDIPTMQEAGLAGYDVSAWKGLMAPAATPAAIIGRLHAAAVKALADPDIRSRMVAMGAEPVGDRPEHFGQTLRAESARW AALVKSTGATLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34323; Mature: 34192
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPATKGHAMQRRTVLLAAAVAAATHDGAHAQQPWPGKPIRLIVGYAPGGSADIAARLI CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH ADKLRAELGQPVVVENKTGAGGNIGTEAVVRAAPDGHTLLLAAAAQIVINPSLYKGMSFD HHHHHHHCCCCEEEECCCCCCCCCCCHHHEEECCCCCEEHEEEHHHHEECCHHHCCCCCC PLKELAPVTRLQTEHNLMVLGAQVPAKDLQAFIAYAKAHPQGVTFASPGAGSPSHLAGAL HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH LNQMAGLTMQHVPYKGSALALNDLLAGHVSMSIDNMPALLPQVRSGRLRAIAVASTRRAA HHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCC AAPDIPTMQEAGLAGYDVSAWKGLMAPAATPAAIIGRLHAAAVKALADPDIRSRMVAMGA CCCCCCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC EPVGDRPEHFGQTLRAESARWAALVKSTGATLE CCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCC >Mature Secondary Structure STPATKGHAMQRRTVLLAAAVAAATHDGAHAQQPWPGKPIRLIVGYAPGGSADIAARLI CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH ADKLRAELGQPVVVENKTGAGGNIGTEAVVRAAPDGHTLLLAAAAQIVINPSLYKGMSFD HHHHHHHCCCCEEEECCCCCCCCCCCHHHEEECCCCCEEHEEEHHHHEECCHHHCCCCCC PLKELAPVTRLQTEHNLMVLGAQVPAKDLQAFIAYAKAHPQGVTFASPGAGSPSHLAGAL HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHH LNQMAGLTMQHVPYKGSALALNDLLAGHVSMSIDNMPALLPQVRSGRLRAIAVASTRRAA HHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCC AAPDIPTMQEAGLAGYDVSAWKGLMAPAATPAAIIGRLHAAAVKALADPDIRSRMVAMGA CCCCCCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC EPVGDRPEHFGQTLRAESARWAALVKSTGATLE CCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]