| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609433
Identifier: 121609433
GI number: 121609433
Start: 2809985
End: 2810797
Strand: Direct
Name: 121609433
Synonym: Veis_2477
Alternate gene names: NA
Gene position: 2809985-2810797 (Clockwise)
Preceding gene: 121609432
Following gene: 121609434
Centisome position: 50.48
GC content: 68.88
Gene sequence:
>813_bases ATGTCCGAGGCCGGCGCAGCGCCGCCGCCCACGTTGACGGTGGCGGTGCTGACCCACAACGAGGCGCACCGCATCGAAGC CTGTCTGCGCAGCGCCGCTTTTGCCGACCAGTTGCTGGTGGTCGACAGCGGCAGCGAGGACGACACCGTGGCCATGGCCC GCGCGCTGGGCGCCGAGGTTCATAGCGCGCCGGACTGGCAGGGCTTTGCCGTGCAGCGCAACCGGCTGCTGGCGCATGCG CGCGGCGACTATGTGTTCTTTCTCGATGCCGATGAGGTGATGACGCCGGATTTTGCGCGCGAGTTGCAGGCCATCGTGCG CTCGGGCGCGCAGGCGGTCTGGAGCATACGCTGGCGCATCGTGGCCTTTGGGCATGAGCTCAGGCGCTTTCGCGCGCAAT CGTATATCGAGCGCCTGTTCGTGCGCGCCCTGCTCGAGGAATACACCGGCGTGGTGCACGAGCAGGCCCGTCTGTACCCG CTGCCCGGCGGCGCTGCCGTGCCGCGCCGGCGCATCGAGGCGCGGCTGCTGCATTACTCGCGCACCACGGTGCGGGGCAG CCTGGAAAAGCTCACCCAGTATGCGATGCTCGGGGCGGCCAAGCGCGCCGGGCAGGGCCGGCGGGGCGGCGTGCTGCGCG GCCTGGCCTCGGGGCTGTGGATGTTCTTGCGCCTGTATCTGGTGCGCCTGGGTTTTCTGTGTGGCGGGGCGGGCTTTCTG TACTGCCTGTTCGTGGCGCTGGAGGCTTTTTTTCGCCATGCAGCGCTGTACTACGACCGCGACAGTCTGACGGGGCGGGT GATCCGCCGATGA
Upstream 100 bases:
>100_bases GTATCTGGATGTCGCCCGCACGGGCCAGGCCAAGTGCCCTTATTGCGGGACGGTGTACCGCTTGCAGGCCGGCGCGCCTG CGCCTGCCGGGCACTGATCG
Downstream 100 bases:
>100_bases CTGCGCAGCGCTGGTTCGAACGCTGCGCGAACTGCGGCGCTTTCATGCTTGCGGGGCTGGCGCTGTGGCTGCCCTCGGGG TATTCCTACGGCGCGGCCCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSEAGAAPPPTLTVAVLTHNEAHRIEACLRSAAFADQLLVVDSGSEDDTVAMARALGAEVHSAPDWQGFAVQRNRLLAHA RGDYVFFLDADEVMTPDFARELQAIVRSGAQAVWSIRWRIVAFGHELRRFRAQSYIERLFVRALLEEYTGVVHEQARLYP LPGGAAVPRRRIEARLLHYSRTTVRGSLEKLTQYAMLGAAKRAGQGRRGGVLRGLASGLWMFLRLYLVRLGFLCGGAGFL YCLFVALEAFFRHAALYYDRDSLTGRVIRR
Sequences:
>Translated_270_residues MSEAGAAPPPTLTVAVLTHNEAHRIEACLRSAAFADQLLVVDSGSEDDTVAMARALGAEVHSAPDWQGFAVQRNRLLAHA RGDYVFFLDADEVMTPDFARELQAIVRSGAQAVWSIRWRIVAFGHELRRFRAQSYIERLFVRALLEEYTGVVHEQARLYP LPGGAAVPRRRIEARLLHYSRTTVRGSLEKLTQYAMLGAAKRAGQGRRGGVLRGLASGLWMFLRLYLVRLGFLCGGAGFL YCLFVALEAFFRHAALYYDRDSLTGRVIRR >Mature_269_residues SEAGAAPPPTLTVAVLTHNEAHRIEACLRSAAFADQLLVVDSGSEDDTVAMARALGAEVHSAPDWQGFAVQRNRLLAHAR GDYVFFLDADEVMTPDFARELQAIVRSGAQAVWSIRWRIVAFGHELRRFRAQSYIERLFVRALLEEYTGVVHEQARLYPL PGGAAVPRRRIEARLLHYSRTTVRGSLEKLTQYAMLGAAKRAGQGRRGGVLRGLASGLWMFLRLYLVRLGFLCGGAGFLY CLFVALEAFFRHAALYYDRDSLTGRVIRR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 30151; Mature: 30020
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAGAAPPPTLTVAVLTHNEAHRIEACLRSAAFADQLLVVDSGSEDDTVAMARALGAEV CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH HSAPDWQGFAVQRNRLLAHARGDYVFFLDADEVMTPDFARELQAIVRSGAQAVWSIRWRI CCCCCCCCHHHHHHHHHEEECCCEEEEEECCHHCCCHHHHHHHHHHHHCHHHHHHHHHHH VAFGHELRRFRAQSYIERLFVRALLEEYTGVVHEQARLYPLPGGAAVPRRRIEARLLHYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHH RTTVRGSLEKLTQYAMLGAAKRAGQGRRGGVLRGLASGLWMFLRLYLVRLGFLCGGAGFL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH YCLFVALEAFFRHAALYYDRDSLTGRVIRR HHHHHHHHHHHHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure SEAGAAPPPTLTVAVLTHNEAHRIEACLRSAAFADQLLVVDSGSEDDTVAMARALGAEV CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH HSAPDWQGFAVQRNRLLAHARGDYVFFLDADEVMTPDFARELQAIVRSGAQAVWSIRWRI CCCCCCCCHHHHHHHHHEEECCCEEEEEECCHHCCCHHHHHHHHHHHHCHHHHHHHHHHH VAFGHELRRFRAQSYIERLFVRALLEEYTGVVHEQARLYPLPGGAAVPRRRIEARLLHYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHH RTTVRGSLEKLTQYAMLGAAKRAGQGRRGGVLRGLASGLWMFLRLYLVRLGFLCGGAGFL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH YCLFVALEAFFRHAALYYDRDSLTGRVIRR HHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]