| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609384
Identifier: 121609384
GI number: 121609384
Start: 2745954
End: 2746256
Strand: Direct
Name: 121609384
Synonym: Veis_2427
Alternate gene names: NA
Gene position: 2745954-2746256 (Clockwise)
Preceding gene: 121609381
Following gene: 121609385
Centisome position: 49.33
GC content: 62.05
Gene sequence:
>303_bases ATGCCAATGCCAATGACTGCTGCTGCCATTCGCCCTGTGTCGATCAAGATCGACGACGACACCAAGGCCCGCGTGAAACG GTTGGCTGTTGCTCGCCAGCGCACGGCTCACTGGCTCATGCACGAGGCGATCACCCAGTACGTCGAGCGCGAGGAAAAGC GCGAGGCATTCCGGCAGGACACACTCAAGGCATGGCAAGAGTACCGCACCACCGGGCTGCATGTGAGCGCCGACGAAGCC GATGCGTGGCTGGCCCAGCTCGAACAGGGCAAGGACATCGAGCCACCTGAATGCCACGTCTGA
Upstream 100 bases:
>100_bases ACTTGCGTGAGTCAATGGCCCGTTGGACGCCATGAGCGGCCAAGTCGCACCGCAAGTATGCTTAAGGTAATACCCTGAGA TACTCGAACGGAGGTTGCCA
Downstream 100 bases:
>100_bases TCTGGTCACAGCCGGCGTTGCTCGATGTGCAACGCCTCTATCGCTTCCTTGCGCCAAAAACATCGACGCCGCCAAACGTG CGGCGAAGGCCATGCGGCAA
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator CopG Family; Transcriptional Regulator-Like Protein; Transcriptional Regulator; Addiction Module RHH Domain Protein; Xin-Antitoxin System Toxin Component RelE Family
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPMPMTAAAIRPVSIKIDDDTKARVKRLAVARQRTAHWLMHEAITQYVEREEKREAFRQDTLKAWQEYRTTGLHVSADEA DAWLAQLEQGKDIEPPECHV
Sequences:
>Translated_100_residues MPMPMTAAAIRPVSIKIDDDTKARVKRLAVARQRTAHWLMHEAITQYVEREEKREAFRQDTLKAWQEYRTTGLHVSADEA DAWLAQLEQGKDIEPPECHV >Mature_99_residues PMPMTAAAIRPVSIKIDDDTKARVKRLAVARQRTAHWLMHEAITQYVEREEKREAFRQDTLKAWQEYRTTGLHVSADEAD AWLAQLEQGKDIEPPECHV
Specific function: Unknown
COG id: COG3905
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11583; Mature: 11452
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPMTAAAIRPVSIKIDDDTKARVKRLAVARQRTAHWLMHEAITQYVEREEKREAFRQD CCCCCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLKAWQEYRTTGLHVSADEADAWLAQLEQGKDIEPPECHV HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PMPMTAAAIRPVSIKIDDDTKARVKRLAVARQRTAHWLMHEAITQYVEREEKREAFRQD CCCCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLKAWQEYRTTGLHVSADEADAWLAQLEQGKDIEPPECHV HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA