| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is hpcG [H]
Identifier: 121609367
GI number: 121609367
Start: 2724867
End: 2725679
Strand: Direct
Name: hpcG [H]
Synonym: Veis_2410
Alternate gene names: 121609367
Gene position: 2724867-2725679 (Clockwise)
Preceding gene: 121609366
Following gene: 121609368
Centisome position: 48.95
GC content: 66.91
Gene sequence:
>813_bases GTGAGCCTGGACCAGAACACCCTCGCCCAGGCCGCCGAGCGGTTGCAGCAGGCGCAGCGCACGCGCCTGGCCTGCCGCCA GTTCTCGCTCGACTACCCGGAGATGACGATCGACGACGCCTACGCGATCCAGCACGCCTGGATGCAGCTCGAGCTGCGCA ATGGCCGCACGATAAAAGGCCACAAGATTGGCCTCACGTCGAAGGCGATGCAGCGCGCGGTGAACATCGCCGAGCCGGAC TACGGCACGCTGCTGGACGACATGTTCTACCGCGACGGCGCGGTGATCGAGTCGGAGCGCTTCCTGCAGTTGAAGATCGA GGCCGAACTGGCCTTCGTGCTCGCCAAGCCGCTGGCTGGCCCCGACTGCACGCTGTTCGACGTGCTCGACGCCACCGCGT ACATCACGCCCGCGCTGGAGATCCTCGACGCGCGCATCGAGCGCATCGACCCGCAAACCAGGCGCATGCGCACCGTGCTC GACACCATCTCCGATAACGCGGCCAACGCCGCCTTGGTGCTGGGGGGACGCCCGTTCAGGCCGGCGGTGTCGGACGCCGA CATGCGACGCATCGGCGCCATCGTCAGCCGCAACGGCGAGGTCGAAGAAACCGGCCTGGCCGCCGGGGTGCTCAATCACC CCGGCTATGGCGTGGCGTGGCTCGCCAATCGGCTGCATCGTTTTGGCGTGACCTTGCAGCCCAGGCAGGTCATCCTGGCG GGCTCGTTCATCCGGCCCATCGAGGTTGTCAAGGGCGATACGGTGGTGGCCGACTACGGCGAGTTCGGCACCGTTTCTTG CCACTTCGGATGA
Upstream 100 bases:
>100_bases AACGTCGTGAAGGCCGAAGAGGTGGCGCCATGAAACGACATCCTGTGTTAGCCCGGTGTTTTTGCTTGCCTGCGGCCTCG ACCGGCAGGAGGGTAGTCCG
Downstream 100 bases:
>100_bases ACGACGCGCATGTCCTCCCCCCTCATTTCCGGCGCGCACCCGGGCCGGGGGAATCACTTGGCGCGGTGCGGCCAAGAGCA CCGGCGCGAGCGCGTTGCGG
Product: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSLDQNTLAQAAERLQQAQRTRLACRQFSLDYPEMTIDDAYAIQHAWMQLELRNGRTIKGHKIGLTSKAMQRAVNIAEPD YGTLLDDMFYRDGAVIESERFLQLKIEAELAFVLAKPLAGPDCTLFDVLDATAYITPALEILDARIERIDPQTRRMRTVL DTISDNAANAALVLGGRPFRPAVSDADMRRIGAIVSRNGEVEETGLAAGVLNHPGYGVAWLANRLHRFGVTLQPRQVILA GSFIRPIEVVKGDTVVADYGEFGTVSCHFG
Sequences:
>Translated_270_residues MSLDQNTLAQAAERLQQAQRTRLACRQFSLDYPEMTIDDAYAIQHAWMQLELRNGRTIKGHKIGLTSKAMQRAVNIAEPD YGTLLDDMFYRDGAVIESERFLQLKIEAELAFVLAKPLAGPDCTLFDVLDATAYITPALEILDARIERIDPQTRRMRTVL DTISDNAANAALVLGGRPFRPAVSDADMRRIGAIVSRNGEVEETGLAAGVLNHPGYGVAWLANRLHRFGVTLQPRQVILA GSFIRPIEVVKGDTVVADYGEFGTVSCHFG >Mature_269_residues SLDQNTLAQAAERLQQAQRTRLACRQFSLDYPEMTIDDAYAIQHAWMQLELRNGRTIKGHKIGLTSKAMQRAVNIAEPDY GTLLDDMFYRDGAVIESERFLQLKIEAELAFVLAKPLAGPDCTLFDVLDATAYITPALEILDARIERIDPQTRRMRTVLD TISDNAANAALVLGGRPFRPAVSDADMRRIGAIVSRNGEVEETGLAAGVLNHPGYGVAWLANRLHRFGVTLQPRQVILAG SFIRPIEVVKGDTVVADYGEFGTVSCHFG
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=230, Percent_Identity=34.7826086956522, Blast_Score=136, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 29814; Mature: 29683
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDQNTLAQAAERLQQAQRTRLACRQFSLDYPEMTIDDAYAIQHAWMQLELRNGRTIKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEECCCCEECC HKIGLTSKAMQRAVNIAEPDYGTLLDDMFYRDGAVIESERFLQLKIEAELAFVLAKPLAG EEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEHHEEEEECCCCCC PDCTLFDVLDATAYITPALEILDARIERIDPQTRRMRTVLDTISDNAANAALVLGGRPFR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC PAVSDADMRRIGAIVSRNGEVEETGLAAGVLNHPGYGVAWLANRLHRFGVTLQPRQVILA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE GSFIRPIEVVKGDTVVADYGEFGTVSCHFG CCCCCHHHHCCCCEEEEECCCCCEEEEECC >Mature Secondary Structure SLDQNTLAQAAERLQQAQRTRLACRQFSLDYPEMTIDDAYAIQHAWMQLELRNGRTIKG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEECCCCEECC HKIGLTSKAMQRAVNIAEPDYGTLLDDMFYRDGAVIESERFLQLKIEAELAFVLAKPLAG EEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEHHEEEEECCCCCC PDCTLFDVLDATAYITPALEILDARIERIDPQTRRMRTVLDTISDNAANAALVLGGRPFR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC PAVSDADMRRIGAIVSRNGEVEETGLAAGVLNHPGYGVAWLANRLHRFGVTLQPRQVILA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE GSFIRPIEVVKGDTVVADYGEFGTVSCHFG CCCCCHHHHCCCCEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]