Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121609363

Identifier: 121609363

GI number: 121609363

Start: 2721614

End: 2722588

Strand: Direct

Name: 121609363

Synonym: Veis_2406

Alternate gene names: NA

Gene position: 2721614-2722588 (Clockwise)

Preceding gene: 121609360

Following gene: 121609364

Centisome position: 48.89

GC content: 66.15

Gene sequence:

>975_bases
GTGAGCAATGCCGTCGCCCCTTTTGCCGTCGCTGCGTGCGTGGCGCTTGCCGCATGGCCCGCCATGGCGCAGGACCACTG
GCCCGACAAGCCTGTCAAGCTCGTATTGCCCTACCCGCCGGGTGGCAACGTCGATGGCGCTGCGCGCATCATCGCCGAGC
AGTTGCAGGCTGTGTTCATGCAGCCTTTCATCATCGACAACCGGCCCGGTGCCGGCGGCATGATCGCCGGCGCGGCGGTT
GCCACGTCCGTGCCTGACGGCTACACCTTCTTCATGGGCGCGAACGGGCCGATCCTGTTCGCGCCAACCGTTTTCAAGCG
CAACGTCTACGACTGGAAGAAGGACTTCGCGCCGGTCAGTTCCGTGTCATTCACGCCGCTGGTGTTGCAGGTGCATCCGT
CCACGCCATACAAAACCGTGGCAGACCTGTTCGCCGAGGGCAAGAAGCCCGGCAACACGCTGACCATGGCCTCGCCCGGC
GCCGGCACGCAAAACCACTTGGTCAGCGAGTATCTGCAGCGCGCAAGCGGTGCCCGCTGGACCACGGTGCACTACAAGGG
CAACGCGCCCGCCACCACGGACCTGCTGGGCGGCCAGGTGCAGTTCAACTTCGACCAGATATCGGTGGCCGGCCCCTTCA
TCGCGCAGGGCCGCAGCCGCGCGCTGGCCGTGACATCGCCCAAGCGCCTGCCGCAATGGCCCGATGTGCCGACGCTTCAG
GAAGCCGGTTTCAAGGACTTCAGCCCCGAGACTTTCACCGGCATCCTGGCGCCGCGCGCCACACCGCCGGCGATCGTTGA
GCGCTTGTCGCAGGCGCTGCAGAAAATCCTCGCCGACAAGGCCGTGCAGGCCAGGTTCGAGACGCTTGGCGCGCAGGCCC
GCGGCAGTTCACCCGGGCAGTTCACCGAGTTTCTGACGCAGGAAGACGCGCGGTGGATGCCGGTCATCGAGCAAGCCAAC
ATCCACGCCGAATGA

Upstream 100 bases:

>100_bases
TATTGCTTTGCAGCATTCGATGCGTGCTCCTTAGAGTGGACGGGTCGCCGATCAAACCGCAGCCCATTTGCGGTGCCGGC
GCCGGAGCAGGAGAGTCGCT

Downstream 100 bases:

>100_bases
ACACCGTCACCACGACCCTCGGGCGCGCCGCGCCCGCCGCGCGCACCAGCGTGTACGTCGCCGGCTTTGGCCACAAGAAC
CCGATCCCGGCGGGCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSNAVAPFAVAACVALAAWPAMAQDHWPDKPVKLVLPYPPGGNVDGAARIIAEQLQAVFMQPFIIDNRPGAGGMIAGAAV
ATSVPDGYTFFMGANGPILFAPTVFKRNVYDWKKDFAPVSSVSFTPLVLQVHPSTPYKTVADLFAEGKKPGNTLTMASPG
AGTQNHLVSEYLQRASGARWTTVHYKGNAPATTDLLGGQVQFNFDQISVAGPFIAQGRSRALAVTSPKRLPQWPDVPTLQ
EAGFKDFSPETFTGILAPRATPPAIVERLSQALQKILADKAVQARFETLGAQARGSSPGQFTEFLTQEDARWMPVIEQAN
IHAE

Sequences:

>Translated_324_residues
MSNAVAPFAVAACVALAAWPAMAQDHWPDKPVKLVLPYPPGGNVDGAARIIAEQLQAVFMQPFIIDNRPGAGGMIAGAAV
ATSVPDGYTFFMGANGPILFAPTVFKRNVYDWKKDFAPVSSVSFTPLVLQVHPSTPYKTVADLFAEGKKPGNTLTMASPG
AGTQNHLVSEYLQRASGARWTTVHYKGNAPATTDLLGGQVQFNFDQISVAGPFIAQGRSRALAVTSPKRLPQWPDVPTLQ
EAGFKDFSPETFTGILAPRATPPAIVERLSQALQKILADKAVQARFETLGAQARGSSPGQFTEFLTQEDARWMPVIEQAN
IHAE
>Mature_323_residues
SNAVAPFAVAACVALAAWPAMAQDHWPDKPVKLVLPYPPGGNVDGAARIIAEQLQAVFMQPFIIDNRPGAGGMIAGAAVA
TSVPDGYTFFMGANGPILFAPTVFKRNVYDWKKDFAPVSSVSFTPLVLQVHPSTPYKTVADLFAEGKKPGNTLTMASPGA
GTQNHLVSEYLQRASGARWTTVHYKGNAPATTDLLGGQVQFNFDQISVAGPFIAQGRSRALAVTSPKRLPQWPDVPTLQE
AGFKDFSPETFTGILAPRATPPAIVERLSQALQKILADKAVQARFETLGAQARGSSPGQFTEFLTQEDARWMPVIEQANI
HAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34686; Mature: 34555

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAVAPFAVAACVALAAWPAMAQDHWPDKPVKLVLPYPPGGNVDGAARIIAEQLQAVFM
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
QPFIIDNRPGAGGMIAGAAVATSVPDGYTFFMGANGPILFAPTVFKRNVYDWKKDFAPVS
CCEEEECCCCCCCEEEHHHHHCCCCCCEEEEEECCCCEEECCHHHHCCHHHHHHHCCCCC
SVSFTPLVLQVHPSTPYKTVADLFAEGKKPGNTLTMASPGAGTQNHLVSEYLQRASGARW
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE
TTVHYKGNAPATTDLLGGQVQFNFDQISVAGPFIAQGRSRALAVTSPKRLPQWPDVPTLQ
EEEEEECCCCCHHHHCCCEEEEECCEEEECCCHHHCCCCCEEEEECCCCCCCCCCCCCHH
EAGFKDFSPETFTGILAPRATPPAIVERLSQALQKILADKAVQARFETLGAQARGSSPGQ
HCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
FTEFLTQEDARWMPVIEQANIHAE
HHHHHHHCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SNAVAPFAVAACVALAAWPAMAQDHWPDKPVKLVLPYPPGGNVDGAARIIAEQLQAVFM
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
QPFIIDNRPGAGGMIAGAAVATSVPDGYTFFMGANGPILFAPTVFKRNVYDWKKDFAPVS
CCEEEECCCCCCCEEEHHHHHCCCCCCEEEEEECCCCEEECCHHHHCCHHHHHHHCCCCC
SVSFTPLVLQVHPSTPYKTVADLFAEGKKPGNTLTMASPGAGTQNHLVSEYLQRASGARW
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEE
TTVHYKGNAPATTDLLGGQVQFNFDQISVAGPFIAQGRSRALAVTSPKRLPQWPDVPTLQ
EEEEEECCCCCHHHHCCCEEEEECCEEEECCCHHHCCCCCEEEEECCCCCCCCCCCCCHH
EAGFKDFSPETFTGILAPRATPPAIVERLSQALQKILADKAVQARFETLGAQARGSSPGQ
HCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
FTEFLTQEDARWMPVIEQANIHAE
HHHHHHHCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271; 9524276 [H]