Definition Bartonella bacilliformis KC583, complete genome.
Accession NC_008783
Length 1,445,021

Click here to switch to the map view.

The map label for this gene is truB

Identifier: 121602518

GI number:

Start: 1300529

End: 1301491

Strand: Direct

Name: truB

Synonym: BARBAKC583_1256

Alternate gene names: NA

Gene position: NA

Preceding gene: 121601742

Following gene: 121601958

Centisome position: NA

GC content: NA

Gene sequence:

>963_bases
ATGTCACGGCAATCTAAAAAAAAAGGTCGTTCTATTTCTGGCTGGGTTATTCTTGATAAACCAAAAGCAATGAAATCAAC
AGAAGCCGTCTCAAAAATCAAACGGCTCTTTAATGCACAAAAAGCAGGACATGCAGGAACACTTGATCCGCTTGCTTCTG
GTTTACTCCCTATTGCATTGGGAGAAGCAACCAAAACTGTTCCTTATGTTATGGAAGGAACAAAAACCTACCATTTTCAT
GTAGCTTGGGGAGAAGAACGCTCTACAGATGATCTAGAAGGAGTGGTGACTAAAACATCCTCTAAACGACCAACACAGGA
GGAAATCTTTGCTCTTTTACCTAAATATACGGGTGTTATTTTGCAAACCCCACCACAATTCTCTGCGATCAAAATTGCCG
GCAACCGTGCCTATGATCTAGCACGTGAAGGTGAAATTTTCGAAATTCCACCCCGCCAAGTAAAAATTGATTCCCTTGAA
CTCATTGGAACAACAGATCAAGGATATTCCATCTTTGAAATGACATGCGGAAAAGGAACCTACGTGCGCTCCTTAGCACG
CGATATGGGACATGATCTTGGTTGTTATGGGTATATTGCTGATTTACGCCGTACTGCAGTCGCGCCTTTTTGTGAAAATG
ATCTCATTACATGGGATGCATTAAAAGCTGCAATACCACACGAAAACACAACAGATGAAAATTGTATACCTCTCAAGCAA
AATTTCTCTACACTTGATGGATTATTAATTGAAACAGATGTTGCATTAAAGTGTCTTGCTCATTATACCCTTAACCAAAT
TCAAGCACAGCGTGTTAGAATGGGAAATTCAATCCTCTTATGTGATCAAAACATGCCAACGAGTAATATTGATATCTGTG
TAACCTATAAAGCCCAACTGCTTGCTATAGGCACTATTGATCAAAATCAATTCAAGCCAAAACGAATTTTTACTACTTTA
TAA

Upstream 100 bases:

>100_bases
GCTTGATAATAGTTTCGATAATTTTTCAAAAATTGATGCTTTACTTCGCTTACCTGAAGTAGCACGCGATCTTCATCATC
ATAAGCCTGAAGATTAAAAT

Downstream 100 bases:

>100_bases
ATTTCTATCCTAAGATAGCTTCAAAAAATAGTTTTTATAACCAACACATAAGATAAATCCATCCTCATTACTTCGCATTC
AAATGTACACTTTAAAGATT

Product: tRNA pseudouridine synthase B

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>320_residues
MSRQSKKKGRSISGWVILDKPKAMKSTEAVSKIKRLFNAQKAGHAGTLDPLASGLLPIALGEATKTVPYVMEGTKTYHFH
VAWGEERSTDDLEGVVTKTSSKRPTQEEIFALLPKYTGVILQTPPQFSAIKIAGNRAYDLAREGEIFEIPPRQVKIDSLE
LIGTTDQGYSIFEMTCGKGTYVRSLARDMGHDLGCYGYIADLRRTAVAPFCENDLITWDALKAAIPHENTTDENCIPLKQ
NFSTLDGLLIETDVALKCLAHYTLNQIQAQRVRMGNSILLCDQNMPTSNIDICVTYKAQLLAIGTIDQNQFKPKRIFTTL

Sequences:
NA

Specific function: NA

COG id: COG0130

COG function: function code J; Pseudouridine synthase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA