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The map label for this gene is rpoD

Identifier: 121601699

GI number:

Start: 997353

End: 999353

Strand: Reverse

Name: rpoD

Synonym: BARBAKC583_0966

Alternate gene names: NA

Gene position: NA

Preceding gene: 121602151

Following gene: 121602667

Centisome position: NA

GC content: NA

Gene sequence:

>2001_bases
ATGGCAAAGGTTAAAAAGAAAGACAATCTAGAAGTAATGGGTCAAGGAAGCTTAGACAATGCTCCTCTTGATTTTTCCGA
TGACGCCATCAAAAAAATGATAAAGCTTGCCAAAAAAAATGGCTACGTAACAATGGATGAATTAAATGCGGTTCTTCCCT
CTGATGAAGTTACATCCGAACAAATTGAAGATATATTGATGATGTTTTCTGAGATGGGTGTTAACGTTGTAGACGATGAA
GATGAAATAGAAGCTGAGCATTATGAAGGGGAAATTACGGTAGAAGGTGGTGATTTGGTAGAGGCCACTAGCCGTGAAGT
TGCGACGATACCTAAACGTGAAGCAACAGATAGAACAGACGATCCGGTGCGTATGTATTTGCGTGAAATGGGAGCAGTTG
AGCTTCTTTCTCGTGAAGGGGAAATTGCCATTGCTAAGCGCATTGAGGCAGGACGTGAAACAATGATTTCGGGGCTTTGT
GAAAGTCCTTTAACATTTCAGGCGCTTATTATTTGGCGTGAAGAATTGAGAGAACAGCGTATCCTTCTTCGTGAAATTAT
TGATCTTGAAATGACTTACGCTGGACCAGAAGCCAAGCAAGCCCCAATTATTGAGCGGAGTGAAGTAGAAAAAATTAAAA
AAGAAGCATCCCCGTCTGATAAAGATGACGTGGACATTATTGCAGAGGATATAGGTGCTGAAGATGATGAAGATGATGAG
GTTAATTTGTCATTTGCAGCAATGGAAAATGAATTATATCCTCAGATTATGGAAACTTTGAACTTTATTGCTGAAACTTA
TGTCAAATTGAGGAAATTGCAAAATCAGCATGTTGAAAGTAGTTTAGCTGCTTGTAAAGCAAGTGATCTCTCTTCTGCTC
AAAAGAAGAAATCTACTCAATTGAAATCTGATTTGATTCAAGCAGTAAAATCTCTTTCCCTGAACCAAAATCGTATTGAA
GCCTTAGTTGAACAACTGTATGATATTAATAAAAGGTTGGTTCATAATGAGGGTAAATTAAAGCGGATTGCGAATAGTTA
TGGAATTGGGCACGAAGATTTTCTAAAAGAATATCAAGGCCGTGAATTGGATTCAGATTGGGTTAATTATATTGCAACTT
TACCAGGATCTGGTTGGAAAGAATTTTCAACTCGTGAAGTTGAGGTCATTCGTAATTTGCGTAGTGAGATACAAAATCTT
GCGCAAGAAACTGCTATTTCGATAGGAGAGTTTCGTCGGATTGTTACCCAAGTACAAAAGGGTGAGCGCGAAGCGACGAT
TGCTAAAAAAGAAATGGTAGAAGCGAATTTGCGTCTTGTTATTTCAATTGCAAAAAAATACACAAACCGTGGTTTGCAGT
TTCTTGATCTTATTCAGGAAGGTAATATCGGTTTGATGAAGGCCGTTGACAAATTTGAATATCGGCGTGGATATAAGTTT
TCAACTTATGCAACATGGTGGATTCGTCAAGCAATTACGCGTTCAATTGCTGACCAGGCACGTACCATTCGTATTCCTGT
TCATATGATTGAAACTATTAACAAAATTGTTCGTACATCGCGCCAAATTTTACATGAAATTGGGCGCGAACCTACACCAG
AAGAATTATCCAGTAAACTTTCTATGCCTTTAGAAAAAGTGCAAAAAGTTCTTAAAATTGCGAAAGAGCCTATTTCACTT
GAAACGCCTGTTGGTGATGAAGATGATTCTCATTTAGGGGATTTCATTGAGGATAGAAATGCTTTATTGCCAATTGATGC
AGCTATTCAGGCTAATTTGCGTGATACAACAACTCGCGTACTCGCTTCATTAACGCCACGTGAAGAGCGTGTTTTAAGAA
TGCGTTTTGGTATTGGGATGAATACTGATCATACGTTAGAAGAAGTTGGTCAGCAATTTTCAGTCACACGTGAGCGTATC
CGTCAGATTGAAGCAAAAGCACTTCGTAAATTGAAGCATCCTAGTCGTTCACGTAAATTGCGTAGTTTTCTTGATTCATA
A

Upstream 100 bases:

>100_bases
GATTACCTTAAGAAGATGAAACATGATTGATGCGCTAAGTGAGAATGCAAAAGAATTTGATCACACGAAGTCTGTGTAGT
GGTCAAGTTGGAGTGACAGT

Downstream 100 bases:

>100_bases
TGTAATGAAAGCGTGCTTTTTTATGGTCAGTTATCCTTAAATCAGCTGTAAAAGATTGTATATTTTCAATTTTGAATGAT
TGAAGCAGTTCACGTTCATC

Product: RNA polymerase sigma factor RpoD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>666_residues
MAKVKKKDNLEVMGQGSLDNAPLDFSDDAIKKMIKLAKKNGYVTMDELNAVLPSDEVTSEQIEDILMMFSEMGVNVVDDE
DEIEAEHYEGEITVEGGDLVEATSREVATIPKREATDRTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMISGLC
ESPLTFQALIIWREELREQRILLREIIDLEMTYAGPEAKQAPIIERSEVEKIKKEASPSDKDDVDIIAEDIGAEDDEDDE
VNLSFAAMENELYPQIMETLNFIAETYVKLRKLQNQHVESSLAACKASDLSSAQKKKSTQLKSDLIQAVKSLSLNQNRIE
ALVEQLYDINKRLVHNEGKLKRIANSYGIGHEDFLKEYQGRELDSDWVNYIATLPGSGWKEFSTREVEVIRNLRSEIQNL
AQETAISIGEFRRIVTQVQKGEREATIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKF
STYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELSSKLSMPLEKVQKVLKIAKEPISL
ETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDTTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERI
RQIEAKALRKLKHPSRSRKLRSFLDS

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA