| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is mce4C
Identifier: 121639416
GI number: 121639416
Start: 3895380
End: 3896453
Strand: Reverse
Name: mce4C
Synonym: BCG_3561c
Alternate gene names: NA
Gene position: 3896453-3895380 (Counterclockwise)
Preceding gene: 121639417
Following gene: 121639415
Centisome position: 89.07
GC content: 64.15
Gene sequence:
>1074_bases TTGCTAAATAGGAAGCCAAGTAGCAAACACGAACGCGACCCGCTCCGCACCGGCATCTTCGGCCTGGTGCTGGTGATCTG CGTCGTCCTGATCGCATTCGGCTACAGCGGGTTGCCTTTCTGGCCACAGGGCAAACCCTACGACGCGTATTTCACCGACG CCGGTGGGATCACCCCCGGTAACTCGGTTTATGTCTCGGGCCTCAAGGTGGGCGCGGTGTCGGCCGTGAGTCTGGCCGGA AACAGTGCAAAGGTCACCTTCAGCGTGGACCGCAGCATCGTCGTCGGCGACCAGTCCCTGGCCGCGATCCGCACCGACAC CATCCTCGGCGAGCGCTCCATCGCGGTCAGTCCGGCTGGCTCCGGCAAGTCGACCACGATTCCGTTGAGCCGGACCACCA CGCCCTACACGCTCAACGGGGTGCTGCAGGATCTGGGCCGCAACGCCAACGACCTGAATAGGCCGCAGTTCGAGCAGGCC TTGAACGTGTTCACCCAGGCCTTGCATGACGCCACCCCGCAGGTGCGTGGTGCCGTGGACGGGCTGACGTCGCTGTCGCG CGCCCTGAATCGTCGCGACGAAGCGCTGCAAGGCCTGCTGGCGCACGCCAAGTCGGTGACATCGGTGTTGTCCGAACGCG CCGAACAGGTCAACAAGCTGGTCGAGGACGGCAACCAGTTGTTTGCGGCGCTCGATGCCCGGCGGGCCGCGCTCAGCGCG TTGATCTCTGGGATCGACGATGTTGCAGCGCAGATTTCCGGCTTTGTCGCCGACAACCGTAAGGAGTTCGGCCCGGCTTT GAGCAAGCTCAACCTGGTGCTGGCCAACCTCAACGAGCGCCGCGACTATATCACCGAGGCCCTCAAGCGGCTGCCCACGT ACGCGACCACGCTGGGGGAGGTGGTCGGATCCGGACCCGGATTCAATGTCAACGTCTACAGCGTGCTGCCCGGGCCGCTG GTGGCGACCGTGTTCGACCTGGTCTTTCAGCCGGGCAAGCTGCCGGATAGCCTCGCCGATTACTTGCGCGGGTTTATCCA GGAGCGCTGGATCATCAGACCGAAGTCGCCGTGA
Upstream 100 bases:
>100_bases TACTTCTGCTCGGTGACGATCAAGATCAACGGACCGGCCGGCAGCGACATCCTGCTGCCGATCGGCGGCCAGCCGGATCC CAGCAAGGGGAGGTGCGCCT
Downstream 100 bases:
>100_bases TGGGCCGGGTCGCCATGTTGACGGGGAGCCGGGGATTGCGCTACGCCACGGTGATCGCGCTGGTGGCCGCGCTGGTGGGC GGCGTGTACGTGCTCTCGTC
Product: Mce-family protein mce4C
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; Mce Family C; Mce-Related Protein; Mce-Family C; Mce Related Protein; Mce Family B; Virulence Factor MCE-Like Protein; MCE-Family B; MCE-Family D; Mce Family Protein Mce5C
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MLNRKPSSKHERDPLRTGIFGLVLVICVVLIAFGYSGLPFWPQGKPYDAYFTDAGGITPGNSVYVSGLKVGAVSAVSLAG NSAKVTFSVDRSIVVGDQSLAAIRTDTILGERSIAVSPAGSGKSTTIPLSRTTTPYTLNGVLQDLGRNANDLNRPQFEQA LNVFTQALHDATPQVRGAVDGLTSLSRALNRRDEALQGLLAHAKSVTSVLSERAEQVNKLVEDGNQLFAALDARRAALSA LISGIDDVAAQISGFVADNRKEFGPALSKLNLVLANLNERRDYITEALKRLPTYATTLGEVVGSGPGFNVNVYSVLPGPL VATVFDLVFQPGKLPDSLADYLRGFIQERWIIRPKSP
Sequences:
>Translated_357_residues MLNRKPSSKHERDPLRTGIFGLVLVICVVLIAFGYSGLPFWPQGKPYDAYFTDAGGITPGNSVYVSGLKVGAVSAVSLAG NSAKVTFSVDRSIVVGDQSLAAIRTDTILGERSIAVSPAGSGKSTTIPLSRTTTPYTLNGVLQDLGRNANDLNRPQFEQA LNVFTQALHDATPQVRGAVDGLTSLSRALNRRDEALQGLLAHAKSVTSVLSERAEQVNKLVEDGNQLFAALDARRAALSA LISGIDDVAAQISGFVADNRKEFGPALSKLNLVLANLNERRDYITEALKRLPTYATTLGEVVGSGPGFNVNVYSVLPGPL VATVFDLVFQPGKLPDSLADYLRGFIQERWIIRPKSP >Mature_357_residues MLNRKPSSKHERDPLRTGIFGLVLVICVVLIAFGYSGLPFWPQGKPYDAYFTDAGGITPGNSVYVSGLKVGAVSAVSLAG NSAKVTFSVDRSIVVGDQSLAAIRTDTILGERSIAVSPAGSGKSTTIPLSRTTTPYTLNGVLQDLGRNANDLNRPQFEQA LNVFTQALHDATPQVRGAVDGLTSLSRALNRRDEALQGLLAHAKSVTSVLSERAEQVNKLVEDGNQLFAALDARRAALSA LISGIDDVAAQISGFVADNRKEFGPALSKLNLVLANLNERRDYITEALKRLPTYATTLGEVVGSGPGFNVNVYSVLPGPL VATVFDLVFQPGKLPDSLADYLRGFIQERWIIRPKSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38147; Mature: 38147
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRKPSSKHERDPLRTGIFGLVLVICVVLIAFGYSGLPFWPQGKPYDAYFTDAGGITPG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC NSVYVSGLKVGAVSAVSLAGNSAKVTFSVDRSIVVGDQSLAAIRTDTILGERSIAVSPAG CCEEEECEEECHHHHHEECCCCEEEEEEECCEEEECCCHHHHHHHHHHCCCCCEEECCCC SGKSTTIPLSRTTTPYTLNGVLQDLGRNANDLNRPQFEQALNVFTQALHDATPQVRGAVD CCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH GLTSLSRALNRRDEALQGLLAHAKSVTSVLSERAEQVNKLVEDGNQLFAALDARRAALSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISGIDDVAAQISGFVADNRKEFGPALSKLNLVLANLNERRDYITEALKRLPTYATTLGE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VVGSGPGFNVNVYSVLPGPLVATVFDLVFQPGKLPDSLADYLRGFIQERWIIRPKSP HHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLNRKPSSKHERDPLRTGIFGLVLVICVVLIAFGYSGLPFWPQGKPYDAYFTDAGGITPG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC NSVYVSGLKVGAVSAVSLAGNSAKVTFSVDRSIVVGDQSLAAIRTDTILGERSIAVSPAG CCEEEECEEECHHHHHEECCCCEEEEEEECCEEEECCCHHHHHHHHHHCCCCCEEECCCC SGKSTTIPLSRTTTPYTLNGVLQDLGRNANDLNRPQFEQALNVFTQALHDATPQVRGAVD CCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH GLTSLSRALNRRDEALQGLLAHAKSVTSVLSERAEQVNKLVEDGNQLFAALDARRAALSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISGIDDVAAQISGFVADNRKEFGPALSKLNLVLANLNERRDYITEALKRLPTYATTLGE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VVGSGPGFNVNVYSVLPGPLVATVFDLVFQPGKLPDSLADYLRGFIQERWIIRPKSP HHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA