| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is serB2 [H]
Identifier: 121638926
GI number: 121638926
Start: 3356365
End: 3357594
Strand: Reverse
Name: serB2 [H]
Synonym: BCG_3066c
Alternate gene names: 121638926
Gene position: 3357594-3356365 (Counterclockwise)
Preceding gene: 121638927
Following gene: 121638925
Centisome position: 76.75
GC content: 65.93
Gene sequence:
>1230_bases ATGCCAGCCAAGGTGTCGGTGCTGATCACGGTCACCGGCATGGATCAGCCAGGCGTGACATCCGCGCTCTTCGAGGTGCT CGCGCAGCACGGAGTCGAGCTGCTCAACGTCGAACAAGTGGTGATCCGGGGCCGGCTCACGCTGGGTGTGCTGGTGTCGT GCCCGCTGGACGTTGCCGACGGTACCGCGCTGCGCGACGACGTCGCGTCCGCCATCCACGGGGTGGGTCTAGACGTCGCC ATCGAGCGCAGCGACGATCTGCCAATCATTCGGCAACCGTCCACCCACACCATTTTCGTGCTGGGACGCCCGATTACCGC CGGAGCGTTCAGCGCGGTGGCCAGGGAAGTGGCCGCACTCGGCGTCAACATCGACTTCATCCGCGGCATTTCCGACTACC CGGTCACCGGCCTGGAGTTGCGGGTCTCGGTGCCGCCTGGATGCGTGGGTCCGCTGCAGATCGCCCTGACCAAGGTGGCC GCCGAAGAGCATGTCGATGTGGCCGTCGAGGACTACGGCTTGGCTTGGCGCACCAAACGCCTGATCGTCTTCGACGTCGA CTCCACTCTGGTCCAAGGCGAGGTCATCGAGATGCTGGCAGCCCGTGCGGGTGCCCAGGGACAGGTCGCCGCGATCACCG AGGCCGCGATGCGTGGTGAGCTGGACTTCGCCGAGTCGCTGCAGCGTCGTGTTGCCACCTTGGCGGGGCTGCCCGCGACG GTGATAGACGACGTCGCCGAGCAGCTCGAACTGATGCCCGGTGCTCGGACCACGATCCGGACCTTGCGGCGTCTGGGTTT TCGCTGCGGTGTGGTTTCCGGCGGCTTTCGGCGGATCATCGAGCCGCTCGCACGCGAGTTGATGTTGGATTTCGTTGCGT CCAACGAGCTGGAAATCGTCGATGGCATTCTTACCGGCCGGGTCGTGGGGCCGATTGTTGACCGGCCCGGCAAGGCCAAG GCGCTTCGGGACTTCGCGAGCCAGTATGGGGTGCCGATGGAGCAGACCGTCGCGGTCGGCGACGGCGCCAACGATATCGA CATGCTGGGCGCGGCCGGGCTGGGAATAGCATTCAACGCCAAGCCGGCGTTGCGTGAGGTCGCCGATGCGTCGTTGAGCC ATCCGTACCTGGACACGGTGTTGTTCTTGTTGGGCGTGACTCGCGGTGAGATCGAGGCCGCCGACGCCGGCGACTGTGGG GTGCGTCGCGTCGAAATCCCGGCCGACTAG
Upstream 100 bases:
>100_bases CTTCGCGCCGAGGCCCACGTCGGGCGTCATCATGACGAGCCCGCCATGGTGACTTCGAGCTGATGGGGCCGTACCGGTTG GGCCCCATCTGAAGGTGAGC
Downstream 100 bases:
>100_bases GTTGCTCGCGGAGCATGCGGCACGATAGTCGGGTGCTCGACAACGGCGGCCCTGATGCGGCCGACCCCGACCTGCTGATC GACTTCCGAAACGTGTCCCT
Product: putative phosphoserine phosphatase serB2
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVASAIHGVGLDVA IERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVA AEEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAK ALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCG VRRVEIPAD
Sequences:
>Translated_409_residues MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVASAIHGVGLDVA IERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVA AEEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAK ALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCG VRRVEIPAD >Mature_408_residues PAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVASAIHGVGLDVAI ERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAA EEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPATV IDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAKA LRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGV RRVEIPAD
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=212, Percent_Identity=28.7735849056604, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1790849, Length=235, Percent_Identity=46.8085106382979, Blast_Score=189, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321647, Length=299, Percent_Identity=36.4548494983278, Blast_Score=179, Evalue=9e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 43147; Mature: 43016
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVAD CCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECHHHHHHHCCCEEEEEEECCCCCCC GTALRDDVASAIHGVGLDVAIERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAAL CCHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH GVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAAEEHVDVAVEDYGLAWRTKR CCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCCCEEEECE LIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT EEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIV HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH DGILTGRVVGPIVDRPGKAKALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNA HHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHCCCCCCEEECC KPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGVRRVEIPAD CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCC >Mature Secondary Structure PAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVAD CCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECHHHHHHHCCCEEEEEEECCCCCCC GTALRDDVASAIHGVGLDVAIERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAAL CCHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH GVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAAEEHVDVAVEDYGLAWRTKR CCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCCCEEEECE LIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT EEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIV HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH DGILTGRVVGPIVDRPGKAKALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNA HHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHCCCCCCEEECC KPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGVRRVEIPAD CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA