| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is glnD [H]
Identifier: 121638799
GI number: 121638799
Start: 3182186
End: 3184612
Strand: Reverse
Name: glnD [H]
Synonym: BCG_2939c
Alternate gene names: 121638799
Gene position: 3184612-3182186 (Counterclockwise)
Preceding gene: 121638800
Following gene: 121638797
Centisome position: 72.8
GC content: 66.63
Gene sequence:
>2427_bases ATGGAGGCAGAAAGTCCTTGTGCCGCAAGCGATTTAGCTGTCGCCCGACGCGAGCTGCTGTCCGGCAACCATCGCGAGCT GGATCCGGTCGGGCTGCGGCAGACGTGGCTGGATCTGCATGAGTCTTGGCTGATCGACAAGGCCGACGAGATCGGGATCG CCGATGCCAGTGGTTTTGCAATCGTCGGGGTCGGCGGGCTCGGCCGCCGCGAGCTGCTGCCGTATTCGGACCTGGACGTG TTGCTGTTGCACGATGGCAAGCCTGCTGACATCTTGCGGCCCGTCGCCGACAGGTTGTGGTATCCGTTGTGGGATGCCAA CATTCGGCTCGATCACAGTGTGCGAACGGTTAGTGAGGCATTGACCATCGCCAATTCCGATCTGATGGCCGCTCTAGGCA TGCTGGAAGCCCGCCACATCGCCGGCGATCAGCAGCTCTCGTTCGCGTTGATCGACGGCGTGCGACGCCAGTGGCGCAAC GGAATTCGTTCCCGCATGGGCGAACTCGTCGAAATGACATATGCGCGTTGGCGGCGCTGTGGCCGGATCGCGCAGCGCGC AGAGCCCGATCTCAAATTGGGTCGCGGCGGCCTTCGGGACGTCCAGTTGCTAGACGCGCTGGCTCTCGCCCAGCTCATCG ACCGGCACGGTATCGGCCACACGGACCTGCCGGCGGGTTCGCTGGACGGTGCGTATCGCACCTTGCTGGATGTGCGCACC GAACTGCACCGGGTGTCGGGCCGCGGACGCGACCACCTGCTGGCCCAGTTCGCCGACGAGATCAGCGCCGCGTTGGGTTT CGGTGACCGATTCGATTTGGCGCGCACACTGTCGAGTGCTGGCCGCACCATCGGTTACCACGCCGAAGCCGGGCTGCGGA CTGCGGCGAATGCATTGCCGCGGCGCGGCATCTCGGCCTTGGTGCGGCGGCCAAAGCGGCGACCGCTCGACGAGGGTGTC GTCGAGTATGCCGGCGAAATCGTGCTCGCCCGCGACGCCGAACCCGAACACGATCCCGGCCTGGTGCTCCGAGTGGCCGC CGCGTCGGCCGACACCGGATTGCCCATTGGCGCCGCCACCCTGAGCCGGTTGGCCGCCAGCGTCCCGGATCTGCCGACTC CCTGGCCGCAAGAGGCATTGGACGACTTACTAGTTGTGCTCTCCGCCGGCCCCACCACGGTGGCTACCATCGAAGCGCTC GACCGAACCGGGCTCTGGGGCCGGTTGTTGCCGGAATGGGAGCCCATTCGCGACCTTCCGCCGCGCGACGTCGCCCACAA GTGGACGGTTGACCGACACGTGGTCGAGACCGCGGTGCATGCGGCGCCACTGGCCACCCGGGTGGCACGTCCCGACCTGC TTGCGCTTGGCGCGCTGCTGCACGACATCGGCAAGGGACGGGGCACCGATCACAGTGTGCTCGGGGCCGAATTGGTAATC CCGGTTTGCACCAGGCTGGGGTTGTCGCCGCCGGACGTGTGGACGCTCTCCAAGCTGGTCCGCCACCACCTGCTGCTGCC GATTACGGCAACCCGACGTGACTTAAACGACCCCAAAACCATCGAGGCGGTGTCCGAGGCGCTGGGTGGGGATCCGCAAC TGCTCGAAGTTTTGCACGCCCTGTCGGAGGCGGACTCGAAGGCCACCGGCCCCGGGGTGTGGAGCGATTGGAAGGCGTCA CTGGTCGATGACCTGGTGCGTCGCTGCCGGATGGTGATGGCCGGAGAGTCGCTGCCTCAAGCCGAACCGACTGCACCCCA TTATCTTTCGCTGGCGGCCGACCACGGGGTGCATGTGGAGATTAGTCCGCGCGACGGTGAACGCATCGACGCCGTAATAG TGGCGCCGGACGAGCGGGGACTGGTGTCGAAAGCCGCCGCGGTGCTGGCGCTGAACTCGCTGCGCGTACATTCGGCGTCG GTCAACGTCCACCAGGGTGTCGCGATAACCGAGTTTGTGGTGTCACCACTGTTTGGGTCCCCGCCCGCGGCGGAGTTGGT GCGTCAGCAGTTTGTCGGTGCCCTCAACGGCGACGTCGACGTGCTGGGCATGCTGCAGAAGCGGGACAGCGATGCCGCCA GCTTGGTATCCGCTCGGGCCGGGGACGTGCAGGCCGGGGTGCCCGTGACTCGTACGGCCGCTCCGCCCCGCATCCTGTGG CTCGACACCGCCGCGCCGGCCAAGCTGATCCTCGAAGTTCGGGCCATGGATCGGGCGGGTTTGCTCGCGTTGCTGGCCGG GGCGCTGGAGGGCGCGGGAGCCGGCATTGTCTGGGCGAAGGTCAATACGTTCGGATCGACCGCGGCCGATGTGTTCTGTG TGACGGTCCCCGCGGAGTTGGACGCGAGAGCCGCGGTCGAGCAACACCTGCTGGAGGTGTTGGGCGCCAGCGTCGACGTT GTGGTCGACGAACCCGTCGGCGATTAG
Upstream 100 bases:
>100_bases CGTGCGGGTGCGCACCGGTGAACGCGGACACGACGCGTTATGAAACTAGCCGCACTGTGCTGAACCAACCCGGCCGCACC AATTAGCGCTAGCGAGGGAG
Downstream 100 bases:
>100_bases GATCGCACGCTCATGACCGCTCGGAGTTGAGCTGTCGCAACGCATCGATGCGTGCCTTGATCTGAGCGCGGGTGGCAGCG GCGATCGGAGGCCCGCCACA
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 808; Mature: 808
Protein sequence:
>808_residues MEAESPCAASDLAVARRELLSGNHRELDPVGLRQTWLDLHESWLIDKADEIGIADASGFAIVGVGGLGRRELLPYSDLDV LLLHDGKPADILRPVADRLWYPLWDANIRLDHSVRTVSEALTIANSDLMAALGMLEARHIAGDQQLSFALIDGVRRQWRN GIRSRMGELVEMTYARWRRCGRIAQRAEPDLKLGRGGLRDVQLLDALALAQLIDRHGIGHTDLPAGSLDGAYRTLLDVRT ELHRVSGRGRDHLLAQFADEISAALGFGDRFDLARTLSSAGRTIGYHAEAGLRTAANALPRRGISALVRRPKRRPLDEGV VEYAGEIVLARDAEPEHDPGLVLRVAAASADTGLPIGAATLSRLAASVPDLPTPWPQEALDDLLVVLSAGPTTVATIEAL DRTGLWGRLLPEWEPIRDLPPRDVAHKWTVDRHVVETAVHAAPLATRVARPDLLALGALLHDIGKGRGTDHSVLGAELVI PVCTRLGLSPPDVWTLSKLVRHHLLLPITATRRDLNDPKTIEAVSEALGGDPQLLEVLHALSEADSKATGPGVWSDWKAS LVDDLVRRCRMVMAGESLPQAEPTAPHYLSLAADHGVHVEISPRDGERIDAVIVAPDERGLVSKAAAVLALNSLRVHSAS VNVHQGVAITEFVVSPLFGSPPAAELVRQQFVGALNGDVDVLGMLQKRDSDAASLVSARAGDVQAGVPVTRTAAPPRILW LDTAAPAKLILEVRAMDRAGLLALLAGALEGAGAGIVWAKVNTFGSTAADVFCVTVPAELDARAAVEQHLLEVLGASVDV VVDEPVGD
Sequences:
>Translated_808_residues MEAESPCAASDLAVARRELLSGNHRELDPVGLRQTWLDLHESWLIDKADEIGIADASGFAIVGVGGLGRRELLPYSDLDV LLLHDGKPADILRPVADRLWYPLWDANIRLDHSVRTVSEALTIANSDLMAALGMLEARHIAGDQQLSFALIDGVRRQWRN GIRSRMGELVEMTYARWRRCGRIAQRAEPDLKLGRGGLRDVQLLDALALAQLIDRHGIGHTDLPAGSLDGAYRTLLDVRT ELHRVSGRGRDHLLAQFADEISAALGFGDRFDLARTLSSAGRTIGYHAEAGLRTAANALPRRGISALVRRPKRRPLDEGV VEYAGEIVLARDAEPEHDPGLVLRVAAASADTGLPIGAATLSRLAASVPDLPTPWPQEALDDLLVVLSAGPTTVATIEAL DRTGLWGRLLPEWEPIRDLPPRDVAHKWTVDRHVVETAVHAAPLATRVARPDLLALGALLHDIGKGRGTDHSVLGAELVI PVCTRLGLSPPDVWTLSKLVRHHLLLPITATRRDLNDPKTIEAVSEALGGDPQLLEVLHALSEADSKATGPGVWSDWKAS LVDDLVRRCRMVMAGESLPQAEPTAPHYLSLAADHGVHVEISPRDGERIDAVIVAPDERGLVSKAAAVLALNSLRVHSAS VNVHQGVAITEFVVSPLFGSPPAAELVRQQFVGALNGDVDVLGMLQKRDSDAASLVSARAGDVQAGVPVTRTAAPPRILW LDTAAPAKLILEVRAMDRAGLLALLAGALEGAGAGIVWAKVNTFGSTAADVFCVTVPAELDARAAVEQHLLEVLGASVDV VVDEPVGD >Mature_808_residues MEAESPCAASDLAVARRELLSGNHRELDPVGLRQTWLDLHESWLIDKADEIGIADASGFAIVGVGGLGRRELLPYSDLDV LLLHDGKPADILRPVADRLWYPLWDANIRLDHSVRTVSEALTIANSDLMAALGMLEARHIAGDQQLSFALIDGVRRQWRN GIRSRMGELVEMTYARWRRCGRIAQRAEPDLKLGRGGLRDVQLLDALALAQLIDRHGIGHTDLPAGSLDGAYRTLLDVRT ELHRVSGRGRDHLLAQFADEISAALGFGDRFDLARTLSSAGRTIGYHAEAGLRTAANALPRRGISALVRRPKRRPLDEGV VEYAGEIVLARDAEPEHDPGLVLRVAAASADTGLPIGAATLSRLAASVPDLPTPWPQEALDDLLVVLSAGPTTVATIEAL DRTGLWGRLLPEWEPIRDLPPRDVAHKWTVDRHVVETAVHAAPLATRVARPDLLALGALLHDIGKGRGTDHSVLGAELVI PVCTRLGLSPPDVWTLSKLVRHHLLLPITATRRDLNDPKTIEAVSEALGGDPQLLEVLHALSEADSKATGPGVWSDWKAS LVDDLVRRCRMVMAGESLPQAEPTAPHYLSLAADHGVHVEISPRDGERIDAVIVAPDERGLVSKAAAVLALNSLRVHSAS VNVHQGVAITEFVVSPLFGSPPAAELVRQQFVGALNGDVDVLGMLQKRDSDAASLVSARAGDVQAGVPVTRTAAPPRILW LDTAAPAKLILEVRAMDRAGLLALLAGALEGAGAGIVWAKVNTFGSTAADVFCVTVPAELDARAAVEQHLLEVLGASVDV VVDEPVGD
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=836, Percent_Identity=26.4354066985646, Blast_Score=184, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 86469; Mature: 86469
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAESPCAASDLAVARRELLSGNHRELDPVGLRQTWLDLHESWLIDKADEIGIADASGFA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEE IVGVGGLGRRELLPYSDLDVLLLHDGKPADILRPVADRLWYPLWDANIRLDHSVRTVSEA EEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCEEECHHHHHHHHH LTIANSDLMAALGMLEARHIAGDQQLSFALIDGVRRQWRNGIRSRMGELVEMTYARWRRC HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRIAQRAEPDLKLGRGGLRDVQLLDALALAQLIDRHGIGHTDLPAGSLDGAYRTLLDVRT HHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH ELHRVSGRGRDHLLAQFADEISAALGFGDRFDLARTLSSAGRTIGYHAEAGLRTAANALP HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH RRGISALVRRPKRRPLDEGVVEYAGEIVLARDAEPEHDPGLVLRVAAASADTGLPIGAAT HHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHH LSRLAASVPDLPTPWPQEALDDLLVVLSAGPTTVATIEALDRTGLWGRLLPEWEPIRDLP HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCC PRDVAHKWTVDRHVVETAVHAAPLATRVARPDLLALGALLHDIGKGRGTDHSVLGAELVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH PVCTRLGLSPPDVWTLSKLVRHHLLLPITATRRDLNDPKTIEAVSEALGGDPQLLEVLHA HHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH LSEADSKATGPGVWSDWKASLVDDLVRRCRMVMAGESLPQAEPTAPHYLSLAADHGVHVE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEE ISPRDGERIDAVIVAPDERGLVSKAAAVLALNSLRVHSASVNVHQGVAITEFVVSPLFGS ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCHHCCCHHHHHHHHCCCCC PPAAELVRQQFVGALNGDVDVLGMLQKRDSDAASLVSARAGDVQAGVPVTRTAAPPRILW CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEECCCCCEEEE LDTAAPAKLILEVRAMDRAGLLALLAGALEGAGAGIVWAKVNTFGSTAADVFCVTVPAEL EECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCC DARAAVEQHLLEVLGASVDVVVDEPVGD CHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MEAESPCAASDLAVARRELLSGNHRELDPVGLRQTWLDLHESWLIDKADEIGIADASGFA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEE IVGVGGLGRRELLPYSDLDVLLLHDGKPADILRPVADRLWYPLWDANIRLDHSVRTVSEA EEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCEEECHHHHHHHHH LTIANSDLMAALGMLEARHIAGDQQLSFALIDGVRRQWRNGIRSRMGELVEMTYARWRRC HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRIAQRAEPDLKLGRGGLRDVQLLDALALAQLIDRHGIGHTDLPAGSLDGAYRTLLDVRT HHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH ELHRVSGRGRDHLLAQFADEISAALGFGDRFDLARTLSSAGRTIGYHAEAGLRTAANALP HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH RRGISALVRRPKRRPLDEGVVEYAGEIVLARDAEPEHDPGLVLRVAAASADTGLPIGAAT HHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHH LSRLAASVPDLPTPWPQEALDDLLVVLSAGPTTVATIEALDRTGLWGRLLPEWEPIRDLP HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCC PRDVAHKWTVDRHVVETAVHAAPLATRVARPDLLALGALLHDIGKGRGTDHSVLGAELVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH PVCTRLGLSPPDVWTLSKLVRHHLLLPITATRRDLNDPKTIEAVSEALGGDPQLLEVLHA HHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH LSEADSKATGPGVWSDWKASLVDDLVRRCRMVMAGESLPQAEPTAPHYLSLAADHGVHVE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEE ISPRDGERIDAVIVAPDERGLVSKAAAVLALNSLRVHSASVNVHQGVAITEFVVSPLFGS ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCHHCCCHHHHHHHHCCCCC PPAAELVRQQFVGALNGDVDVLGMLQKRDSDAASLVSARAGDVQAGVPVTRTAAPPRILW CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEECCCCCEEEE LDTAAPAKLILEVRAMDRAGLLALLAGALEGAGAGIVWAKVNTFGSTAADVFCVTVPAEL EECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCC DARAAVEQHLLEVLGASVDVVVDEPVGD CHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA