| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638682
Identifier: 121638682
GI number: 121638682
Start: 3064228
End: 3065271
Strand: Reverse
Name: 121638682
Synonym: BCG_2820c
Alternate gene names: NA
Gene position: 3065271-3064228 (Counterclockwise)
Preceding gene: 121638684
Following gene: 121638681
Centisome position: 70.07
GC content: 71.84
Gene sequence:
>1044_bases ATGGCACGTCAACCTCTGGAGCAGCGGGTGGCCCGGGCGGCGCAGGCGGCGCTGGCCCGACAGCGGTTCGTCAGCGCGAT CGATGTGCTGCTCGGCCTGGGCTGGCTGGCGCCCTCGCATGTCGACCAGTGGCGGCAGGGCCGCGTCGACTCGCTGGAGC AAGTCGTACAGGCCAACCTCAGCAAGATCACCGCCGTGATGGCCGCGTTGCGGCGCTGGGCCCGCGACCGGGGGCTCAAC CCGTCGGAGACCGATTACGTCGCTCGCACTCGGGACCGCCGTCGGCTGCGGTTCAGCGTCACCGGCGAGGACGCCATCGA GCGCGCGTATCGCACGCATTGGGTGTCGCCGGAGCTCTCGGAGCGTGCGGTCGCGCGGCAGAGCCGGCGCCCCGATTTGG TCGTGATCATGCCGGTCAACGACTGGTCATGCGCGTCGTGTGGCGGCAGCGGTGACCTGATGTTCCTTGAGGACGCGGGG CCGTTGTGCCTGGACTGCGCGGACCTTGGCCATCTGGTCTTCTTGCCGTCCGGGGACGCCGCGCTTACCCGCCGGGCCAA GCGGGCGAGCCGGCTTTCGGCGGTGGTGGTGCGGTGGAGCCGGGCGCGTAAGCGATACGAGCGTCAGGGCATCCTGGTCG AGGCGGAGGCGCTGGAGCGCGCCGAAAACGAGTGCCTCGCCGATGCGGAGGTGCGCGCCCGCCGCCGGGAGCGCGACGAG GCGCGACGGGCCAACGAGGACCTGCGTCTGCAAGCCGAATTCGGCGCCGCGATTCGCACGCTGTTCCCGAACTGCCCGGC CGGCCGGGCCGAGGCGATCGCCCGCCACGCGGCCACCCGCGGCAGCGGCAGGATCGGACGTAGCGCGGCCGGACGGGCGC TCGATCCCGAAGCGGTGAGGCTGGCCGTCGCGGCGTCGGTGCGGCATATCGACACTTCGTTCGACGAACTGCTGATGTCG GGTGTCGACCGGGAAACGGCGCGGCACCGGGTGGGTGAGCACGTCGAGGAAGTGCTGCGCGACTGGCGCGCGACCAGCCG CTGA
Upstream 100 bases:
>100_bases TTCCCGACGTTCGCGCATCGCCACTCCGAGCGCGTCCGGCTGGTCGGAGTAACTCAGTTCCGCGGCCTCGGTGCGCAGTC CGACTAGGCTCGGGCAGGTC
Downstream 100 bases:
>100_bases ACCTATTACTACCTAGGTACGACCCTGGTAGCATCTTAGGTTGTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGC GATCCTGGACGCATATGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MARQPLEQRVARAAQAALARQRFVSAIDVLLGLGWLAPSHVDQWRQGRVDSLEQVVQANLSKITAVMAALRRWARDRGLN PSETDYVARTRDRRRLRFSVTGEDAIERAYRTHWVSPELSERAVARQSRRPDLVVIMPVNDWSCASCGGSGDLMFLEDAG PLCLDCADLGHLVFLPSGDAALTRRAKRASRLSAVVVRWSRARKRYERQGILVEAEALERAENECLADAEVRARRRERDE ARRANEDLRLQAEFGAAIRTLFPNCPAGRAEAIARHAATRGSGRIGRSAAGRALDPEAVRLAVAASVRHIDTSFDELLMS GVDRETARHRVGEHVEEVLRDWRATSR
Sequences:
>Translated_347_residues MARQPLEQRVARAAQAALARQRFVSAIDVLLGLGWLAPSHVDQWRQGRVDSLEQVVQANLSKITAVMAALRRWARDRGLN PSETDYVARTRDRRRLRFSVTGEDAIERAYRTHWVSPELSERAVARQSRRPDLVVIMPVNDWSCASCGGSGDLMFLEDAG PLCLDCADLGHLVFLPSGDAALTRRAKRASRLSAVVVRWSRARKRYERQGILVEAEALERAENECLADAEVRARRRERDE ARRANEDLRLQAEFGAAIRTLFPNCPAGRAEAIARHAATRGSGRIGRSAAGRALDPEAVRLAVAASVRHIDTSFDELLMS GVDRETARHRVGEHVEEVLRDWRATSR >Mature_346_residues ARQPLEQRVARAAQAALARQRFVSAIDVLLGLGWLAPSHVDQWRQGRVDSLEQVVQANLSKITAVMAALRRWARDRGLNP SETDYVARTRDRRRLRFSVTGEDAIERAYRTHWVSPELSERAVARQSRRPDLVVIMPVNDWSCASCGGSGDLMFLEDAGP LCLDCADLGHLVFLPSGDAALTRRAKRASRLSAVVVRWSRARKRYERQGILVEAEALERAENECLADAEVRARRRERDEA RRANEDLRLQAEFGAAIRTLFPNCPAGRAEAIARHAATRGSGRIGRSAAGRALDPEAVRLAVAASVRHIDTSFDELLMSG VDRETARHRVGEHVEEVLRDWRATSR
Specific function: Unknown
COG id: COG5586
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38794; Mature: 38663
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQPLEQRVARAAQAALARQRFVSAIDVLLGLGWLAPSHVDQWRQGRVDSLEQVVQANL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH SKITAVMAALRRWARDRGLNPSETDYVARTRDRRRLRFSVTGEDAIERAYRTHWVSPELS HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHH ERAVARQSRRPDLVVIMPVNDWSCASCGGSGDLMFLEDAGPLCLDCADLGHLVFLPSGDA HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCH ALTRRAKRASRLSAVVVRWSRARKRYERQGILVEAEALERAENECLADAEVRARRRERDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH ARRANEDLRLQAEFGAAIRTLFPNCPAGRAEAIARHAATRGSGRIGRSAAGRALDPEAVR HHHCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHH LAVAASVRHIDTSFDELLMSGVDRETARHRVGEHVEEVLRDWRATSR HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ARQPLEQRVARAAQAALARQRFVSAIDVLLGLGWLAPSHVDQWRQGRVDSLEQVVQANL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH SKITAVMAALRRWARDRGLNPSETDYVARTRDRRRLRFSVTGEDAIERAYRTHWVSPELS HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCHH ERAVARQSRRPDLVVIMPVNDWSCASCGGSGDLMFLEDAGPLCLDCADLGHLVFLPSGDA HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCH ALTRRAKRASRLSAVVVRWSRARKRYERQGILVEAEALERAENECLADAEVRARRRERDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH ARRANEDLRLQAEFGAAIRTLFPNCPAGRAEAIARHAATRGSGRIGRSAAGRALDPEAVR HHHCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCHHHHH LAVAASVRHIDTSFDELLMSGVDRETARHRVGEHVEEVLRDWRATSR HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA