| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is lppV
Identifier: 121638676
GI number: 121638676
Start: 3058504
End: 3059067
Strand: Reverse
Name: lppV
Synonym: BCG_2814c
Alternate gene names: NA
Gene position: 3059067-3058504 (Counterclockwise)
Preceding gene: 121638677
Following gene: 121638675
Centisome position: 69.93
GC content: 66.31
Gene sequence:
>564_bases ATGCGGTGGCCGACGGCGTGGCTGCTGGCTCTGGTGTGTGTGATGGCGACTGGGTGCGGACCCAGTGGCCACGGGACGCG GGCCGGCGAGGAGGGGCCGTTGAGCCCGGAGAAGGTCGCCGAGCTGGAGAACCCGTTGCGCGCCAAGCCCCCGCTGGAGG ACGCCAAGGACCAGTACCGGGCGGCGGTGACCCAGCTGGCCAACGCCATCACGGCCCTGGTGCCCGGCCTGACGTGGCGA ACGGATATGGACACCTGGACCGGCTGCGGTGGTGAGTATGAATGGACCAGGGCCAAAGCGGCGTATTTCATGATCGTTTT CAGTGGACCGATCCCCGACGACAAGTGGCTGCAGGCCGTGCAGATCGTCAAGGACGGTGTCGAACAGTTCGGTGCCACCG GCTTTGGGGTGATGAAGAACAAGCCGGCCGACCACGACGTGTACTTCGCCGGTCATGGCGGCGTCGAGTTCAAATTCTCG ACCCAGAAGGCGGCGGTCCTCACCGCACAGTCGGACTGCCGGATCAGCCGGACCGACACCCCAAAACCCTCGCCGACCCC GTAG
Upstream 100 bases:
>100_bases CCGGGCTGCCCGACAACACGGTGGGCCCGCCGCTGCTTCCGCCAATTCTGGGTGGCGGCATGCCGGCAGCGCCCGGCCCA GCACTGAGAGGGGGACGTTG
Downstream 100 bases:
>100_bases CAGTTGGGCTAGGTTGGCCGAGCAGACGCAAAAGCCCCCATTTCGGGCCCGAAATGGGGGCTTTTGCGTCTGCTCACGCC GTAGCGGTTGGTCGAACTGG
Product: putative lipoprotein lppV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWR TDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKFS TQKAAVLTAQSDCRISRTDTPKPSPTP
Sequences:
>Translated_187_residues MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWR TDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKFS TQKAAVLTAQSDCRISRTDTPKPSPTP >Mature_187_residues MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWR TDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKFS TQKAAVLTAQSDCRISRTDTPKPSPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20241; Mature: 20241
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH AAVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAV HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEECCEEEEEEEECCCCCCHHHHHHH QIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKFSTQKAAVLTAQSDCRISRTDT HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCEECCCCC PKPSPTP CCCCCCC >Mature Secondary Structure MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH AAVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAV HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEECCEEEEEEEECCCCCCHHHHHHH QIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKFSTQKAAVLTAQSDCRISRTDT HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCEECCCCC PKPSPTP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA