| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is ceoB [H]
Identifier: 121638566
GI number: 121638566
Start: 2963029
End: 2963712
Strand: Direct
Name: ceoB [H]
Synonym: BCG_2704
Alternate gene names: 121638566
Gene position: 2963029-2963712 (Clockwise)
Preceding gene: 121638560
Following gene: 121638567
Centisome position: 67.73
GC content: 65.64
Gene sequence:
>684_bases ATGCGGGTGGTTGTGATGGGGTGCGGCCGGGTCGGGGCTTCGGTGGCCGACGGACTGTCCCGGATAGGCCATGAAGTCGC GATCATCGACCGTGACAGCGCCGCCTTCAATCGGCTCAGCCCGCAGTTTGCCGGCGAGCGGGTGTTGGGTCAGGGCTTCG ACCGAGATGTGCTGCTGCGTGCGGGCATCCAGGGGGCCGACGCATTCGCCGCGGTGTCCTCCGGCGACAACTCCAACATC ATCTCGGCGCGGTTGGCCCGGGAAACCTTCGGTGTGCCGCGCGTCGTCGCGCGGATCTATGATGCCAAGCGCGCCGAGGT CTATGAGCGACTCGGCATCCCCACCATTGCCACCGTTCCCTGGACCACCGATCGGCTGCTCAACGCGCTAATGCAGGACA CCGAAACCGCCAAGTGGCGCGATCCTACCGGTACCGTCGCGGTCGCCGAGGTCGTCTTACACGAAGACTGGGTGGGCCAC CGGGCGACCGATCTTGAGCAGGCCACCGGCGCTCGGATTGCGTTTCTGATCCGATTCGGAACCGGTGTATTGCCGGAACC GAAGACGGTCCTACAGGCCGGCGATAAGGTCTATATCGCTGCGATATCCGGCCGGGCCGCAGAGGCAGCGGCCATCGCAG CCTTGCCACCCAGTGAGGACTTCGAGTCGGGGGCTCGACGATGA
Upstream 100 bases:
>100_bases TAGCGTTCCCTAGACGAGAATGTTCGCCGACGTAAATCGGCTGGCCACCGCGGGTTGCCGATCGCGTACGGCGCACCGGA CACAGCCGAGAGGACCTCTA
Downstream 100 bases:
>100_bases AAGTAGCTGTCGCCGGAGCGGGTGCGGTGGGCCGCTCGGTCACCCGCGAACTCGTGGAAAACGGACACGACATCACCCTG ATCGAGCGCAACCCCGACCA
Product: TRK system potassium uptake protein ceoB
Products: NA
Alternate protein names: K(+)-uptake protein trkA [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLRAGIQGADAFAAVSSGDNSNI ISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGH RATDLEQATGARIAFLIRFGTGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR
Sequences:
>Translated_227_residues MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLRAGIQGADAFAAVSSGDNSNI ISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGH RATDLEQATGARIAFLIRFGTGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR >Mature_227_residues MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLRAGIQGADAFAAVSSGDNSNI ISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVPWTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGH RATDLEQATGARIAFLIRFGTGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR
Specific function: Part of a potassium transport system [H]
COG id: COG0569
COG function: function code P; K+ transport systems, NAD-binding component
Gene ontology:
Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789685, Length=215, Percent_Identity=22.7906976744186, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 24210; Mature: 24210
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLR CEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHHCCHHHHCCCCHHHHHH AGIQGADAFAAVSSGDNSNIISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVP CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC WTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGHRATDLEQATGARIAFLIRFG CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEC TGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR CCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRVVVMGCGRVGASVADGLSRIGHEVAIIDRDSAAFNRLSPQFAGERVLGQGFDRDVLLR CEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHHCCHHHHCCCCHHHHHH AGIQGADAFAAVSSGDNSNIISARLARETFGVPRVVARIYDAKRAEVYERLGIPTIATVP CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC WTTDRLLNALMQDTETAKWRDPTGTVAVAEVVLHEDWVGHRATDLEQATGARIAFLIRFG CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEC TGVLPEPKTVLQAGDKVYIAAISGRAAEAAAIAALPPSEDFESGARR CCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953; 2294088 [H]