| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121638541
Identifier: 121638541
GI number: 121638541
Start: 2936599
End: 2937402
Strand: Direct
Name: 121638541
Synonym: BCG_2679
Alternate gene names: NA
Gene position: 2936599-2937402 (Clockwise)
Preceding gene: 121638540
Following gene: 121638542
Centisome position: 67.13
GC content: 66.79
Gene sequence:
>804_bases ATGACCTCTTCTCATCTTATCGACACCGAGCAGCTTCTGGCTGACCAACTCGCACAGGCGAGCCCGGATCTGCTGCGCGG GCTGCTCTCGACGTTCATCGCCGCCTTGATGGGGGCTGAAGCCGACGCCCTGTGCGGGGCGGGCTACCGCGAACGCAGCG ATGAGCGGTCCAATCAGCGCAACGGCTACCGCCACCGTGATTTCGACACCCGTGCCGCAACCATCGACGTCGCGATCCCC AAGCTGCGCCAGGGCAGCTATTTCCCGGACTGGCTGCTGCAGCGCCGCAAGCGAGCTGAACGCGCACTGACCAGCGTGGT GGCGACCTGCTACCTGCTGGGAGTATCCACTCGCCGGATGGAGCGCCTGGTCGAAACACTTGGTGTGACAAAGCTTTCCA AGTCGCAAGTGTCGATCATGGCCAAAGAGCTCGACGAAGCCGTAGAGGCGTTTCGGACCCGCCCGCTCGATGCCGGCCCG TATACCTTCCTCGCCGCCGACGCCCTGGTGCTCAAGGTGCGCGAGGCAGGCCGCGTCGTCGGAGTGCACACCTTGATCGC CACCGGCGTCAACGCCGAGGGCTACCGAGAGATCCTGGGCATCCAGGTCACCTCCGCCGAGGACGGGGCCGGCTGGCTGG CGTTCTTCCGCGACCTGGTCGCCCGCGGCCTGTCCGGGGTCGCGCTGGTCACCAGCGACGCCCACGCCGGCCTGGTGGCC GCGATCGGCGCCACCCTGCCCGCAGCGGCCTGGCAGCGCTGCAGAACCCACTACGCAGCCAATCACGGTCGACACAATGC ATAA
Upstream 100 bases:
>100_bases GGGCAGGTAAGGCCGGTGGGCGTGTCGTAGCCCAGTAGTGGGCGGTCATCGCGTGATCCTTCGAAACGACCAGCAAAAGT CAATCGAAGGAAATGACGCA
Downstream 100 bases:
>100_bases CGTCAACCTACTGTTGACGTCATGCCGGAGCCCACACCCACCGCCTACCCCGTCCGCCTCGACGAGCTCATCAACGCCAT CAAACGGGTGCACAGCGACG
Product: putative transposase for insertion sequence element IS1081
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIP KLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGP YTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA AIGATLPAAAWQRCRTHYAANHGRHNA
Sequences:
>Translated_267_residues MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIP KLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGP YTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA AIGATLPAAAWQRCRTHYAANHGRHNA >Mature_266_residues TSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPK LRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPY TFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVAA IGATLPAAAWQRCRTHYAANHGRHNA
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 28975; Mature: 28844
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00435 PEROXIDASE_1 ; PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHCCHHHHHHC NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRM CCCCCCCCCCHHEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCH GVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA HHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH AIGATLPAAAWQRCRTHYAANHGRHNA HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHCCHHHHHHC NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRM CCCCCCCCCCHHEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCH GVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA HHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH AIGATLPAAAWQRCRTHYAANHGRHNA HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]