| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638510
Identifier: 121638510
GI number: 121638510
Start: 2912332
End: 2913003
Strand: Reverse
Name: 121638510
Synonym: BCG_2648c
Alternate gene names: NA
Gene position: 2913003-2912332 (Counterclockwise)
Preceding gene: 121638513
Following gene: 121638509
Centisome position: 66.59
GC content: 68.6
Gene sequence:
>672_bases ATGGGGGTGAGTGTCATCATCAGGTCACTGCAAGAGCCGGTGGGGCGCCGTCGTGCGGTGCTGCGGGCATTGTGTGCGTC GCGGGTTCCGATGAGCATCGCCGCGATCGCCGGCAAGTTGGGCGTGCATCCCAACACCGTCCGCTTCCACCTCGATAACC TGGTCGCTGATGGCCAGGTGGAGCGGGTCGAGCCCGGCCGCGGCCGACCGGGGCGCCCGCCGCTGATGTTTCGGGCGGTC CGGCGGACGGATAGCACTGGGACGCGGCGTTACCGGCTGCTTGCCGAGATCCTCGCCAGTGGCCTTGCCGCCGAACGGGA TTCGCGGGCCATGGCGTTGTCCGCGGGCCGGGCGTGGGGGCGCCAGCTCGAAGCGCCGCCGGCCGGTGCCGACACCGAGG AGACGATCGACCACTTGGTCGCGGTGCTTGACGACCTTGGCTTCGCTCCCGAGCGCCGGGCATCCAACGGCAGGCAACAG GTCGGTCTGCGGCACTGTCCGTTTCTGGAACTCGCCGAAACTCAAGCCGGTGTCGTCTGCCCCGTCCACTTAGGGATCAT GCGGGGAGCCTTGCAAACATGGGCGCCAGTCACCGTCGACCGGCTCGACGCGTTCGTCGAACCCGACCTGTGCCTGGCCC ACTTCACGCCGCTGGAAGGAGCCATTCGGTGA
Upstream 100 bases:
>100_bases GCATTGCCACGTTTGTTGGCCATAGACCCCACCTCCGCAGGTTTTTACAAGTCCGTTTGTGTAAACTTACTGCATTGCTC AGGCGCAGCCGACGAGCCTT
Downstream 100 bases:
>100_bases GCGCCGGACCGGCGATCGAGGTCGCCGTCGCGTTCGTCTGGCTGGGAATGGTGGTGGCGATCTCGTTTCTGGAAGCTCCG CTGAAGTTCCGGGCGGCAGG
Product: putative transcriptional regulatory protein
Products: NA
Alternate protein names: Regulatory Protein ArsR; ArsR Family Transcriptional Regulator; Regulatory Protein; Regulatory Protein IclR; Transcriptional Regulator TrmB; SufR Family Transcriptional Regulator
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRAV RRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQ VGLRHCPFLELAETQAGVVCPVHLGIMRGALQTWAPVTVDRLDAFVEPDLCLAHFTPLEGAIR
Sequences:
>Translated_223_residues MGVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRAV RRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQ VGLRHCPFLELAETQAGVVCPVHLGIMRGALQTWAPVTVDRLDAFVEPDLCLAHFTPLEGAIR >Mature_222_residues GVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQVERVEPGRGRPGRPPLMFRAVR RTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWGRQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQV GLRHCPFLELAETQAGVVCPVHLGIMRGALQTWAPVTVDRLDAFVEPDLCLAHFTPLEGAIR
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24184; Mature: 24053
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECHHHCCCCC ERVEPGRGRPGRPPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWG EECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVC HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCHHHHHCCCCEEH PVHLGIMRGALQTWAPVTVDRLDAFVEPDLCLAHFTPLEGAIR HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCCCCCC >Mature Secondary Structure GVSVIIRSLQEPVGRRRAVLRALCASRVPMSIAAIAGKLGVHPNTVRFHLDNLVADGQV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECHHHCCCCC ERVEPGRGRPGRPPLMFRAVRRTDSTGTRRYRLLAEILASGLAAERDSRAMALSAGRAWG EECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RQLEAPPAGADTEETIDHLVAVLDDLGFAPERRASNGRQQVGLRHCPFLELAETQAGVVC HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCCCCCHHHHHCCCCEEH PVHLGIMRGALQTWAPVTVDRLDAFVEPDLCLAHFTPLEGAIR HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA