| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638450
Identifier: 121638450
GI number: 121638450
Start: 2850823
End: 2852424
Strand: Direct
Name: 121638450
Synonym: BCG_2588
Alternate gene names: NA
Gene position: 2850823-2852424 (Clockwise)
Preceding gene: 121638449
Following gene: 121638451
Centisome position: 65.17
GC content: 69.29
Gene sequence:
>1602_bases GTGCCGCTACGGCCCACTCAGGTGTCCAGCACCGGGCGTACGCGCTGCGCCGGGCGGTCCGGTGTGATCTCATCAGCAGC TATGAGCATCAAAGTTGCGCTGGAGCACCGCACCAGCTACACCTTTGACCGGCTGGTGCGGGTGTATCCGCACATCGTGC GGCTACGCCCGGCGCCGCACTCCCGCACCTCCATCGAGGCCTACTCGCTGCGCATCGAGCCCGCCGACCACTTCATCAAC TGGCAGCAGGACGCGCTGGGCAACTTTCTGGCGCGGCTGGTCTTTCCGAATCCCATGCGCCAACTGCGTATTACCGTCGG GCTTATCGCCGACCTCAAGGTGATCAACCCCTTCGACTTCTTTATCGAGGACTGGGCCGAGATATGGCCCTGCGCAGGGA TGGCCTACCCCAAGGCGCTCGCCGATGACCTGAGGCCGTACTTGCGGCCGGTCGACGAAGACGGCGACGGTTCGGGCCCC GGCGAGCTCACGCAGGCCTGGGTGCGCAACTTCACGGTGCCCGATGGCACCCGCACCATCGACTTCTTGGTCGCACTCAA CCGCGCGATCAACGCCGACGTCGGCTACTGCGTGCGCATGGAGCCCGGAGTTCAGACACCGGATTTCACGCTGCGCACCG GCGTCGGCTCGTGCCGGGACTCGGCGTGGCTGCTGGTCTCGATCCTGCGTCAGTTCGGGCTGGCCGCCCGGTTCGTGTCC GGCTACCTGGTTCAGCTGGCATCCGACATCGAAGCGCTCGACGGGCCGTCGGGGCCCGCCGCCGACTTCACCGACCTGCA CGCGTGGTCCGAGGCATACATCCCGGGTGCCGGCTGGATCGGGCTGGACCCGACGTCGGGGCTGTTGGCCGGCGAGGGCC ACATTCCGCTGGCGGCTACGCCCCACCCCGCCAGCGCGGCACCCATCAGCGGCGGCACCGACTTGTGCGACACCGTGCTG GAGTTCTCCAACACCGTCACCCGCGTACACGAAGACCCACGTGTCACGTTGCCCTACACCGACGAGTCCTGGAAGACCAT CTGTGAGGTGGGCCAGCGCGTCGATGAGCGGCTGGCCGCCGCCGACGTCCGGCTGACCGTCGGCGGCGAACCGACGTTCG TGTCGGTGGATAACCAGGTCGCCGAAGAGTGGCGGACGGCGGCCGACGGCCCACACAAACGCGAACGGGCATCCGACCTG GCCGCCCGCTTGAAGGCGGTGTGGGCCCCGCAGGGACTCATCCACCGCGGTCAGGGCAGGTGGTATCCCGGAGAGCCGTT GCCGCGCTGGCAGATTGCGCTGTATTGGCGCACCGACGGGCGGCCGCTGTGGACCAACGACGCGCTGTTGGCCGACCCCT GGGGCGCCCCGCCCGCCGACCCCGTCGACGACGACGCGGCCTACCGGGTGCTCGCCGGGATCGCCGACGGCTTGGGGCTG CCGATCTCGCAGGTGCGGCCCGCCTACGAAGACCCGTTGAGCCGGCTGGCTGCGGCCGTGCGAATGCCAGCCGGCGACCC GGTGGAATCCGGTGACGACCTCGGCTGCGACACCAACCCCGACACCCCCACCGGCCGCGCCGCGCTGCTGGCGCCTCGAT GA
Upstream 100 bases:
>100_bases TTGAACTTCAAGCAGATTGATGCCGCCCTAGAGGCTGGGCGGATGGCAGCCCGTGCGGCTTTGCAAGCACAGCCGGACCT GGTGCGCTGAACCCGACCAA
Downstream 100 bases:
>100_bases GGCCATCACCTCTCCGGCTGCGTACGTGCTGCCGCTGCACCGCCGCGACGACGGGCAAGGCTGGGCCAGCGCGAACTGGC GGCTGCGCCGCGGTCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase Family Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase-Like Domain Protein; Bacterial Transglutaminase Domain Family Protein; Transglutaminase; Bacterial Transglutaminase-Like Domain Family Protein; IMP Dehydrogenase; Transglutaminase Protein; Protease; Transglutaminase-Like Cysteine Protease; Transglutaminase-Like Family Protein; Malate Oxidoreductase; Transglutaminase N-Domain Protein; Cysteine Protease; Transglutaminase DomaiN-Containing Protein; Transglutaminase N-Terminal Domain Protein; Transglutaminase-Like Super Family Protein; Transglutaminase/Protease-Like Protein; Transglutaminase-Like Superfamily Domain-Containing Protein; Cysteine Proteinase Transglutaminase-Like Superfamily; Transglutaminase-Like Superfamily Domain Protein
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MPLRPTQVSSTGRTRCAGRSGVISSAAMSIKVALEHRTSYTFDRLVRVYPHIVRLRPAPHSRTSIEAYSLRIEPADHFIN WQQDALGNFLARLVFPNPMRQLRITVGLIADLKVINPFDFFIEDWAEIWPCAGMAYPKALADDLRPYLRPVDEDGDGSGP GELTQAWVRNFTVPDGTRTIDFLVALNRAINADVGYCVRMEPGVQTPDFTLRTGVGSCRDSAWLLVSILRQFGLAARFVS GYLVQLASDIEALDGPSGPAADFTDLHAWSEAYIPGAGWIGLDPTSGLLAGEGHIPLAATPHPASAAPISGGTDLCDTVL EFSNTVTRVHEDPRVTLPYTDESWKTICEVGQRVDERLAAADVRLTVGGEPTFVSVDNQVAEEWRTAADGPHKRERASDL AARLKAVWAPQGLIHRGQGRWYPGEPLPRWQIALYWRTDGRPLWTNDALLADPWGAPPADPVDDDAAYRVLAGIADGLGL PISQVRPAYEDPLSRLAAAVRMPAGDPVESGDDLGCDTNPDTPTGRAALLAPR
Sequences:
>Translated_533_residues MPLRPTQVSSTGRTRCAGRSGVISSAAMSIKVALEHRTSYTFDRLVRVYPHIVRLRPAPHSRTSIEAYSLRIEPADHFIN WQQDALGNFLARLVFPNPMRQLRITVGLIADLKVINPFDFFIEDWAEIWPCAGMAYPKALADDLRPYLRPVDEDGDGSGP GELTQAWVRNFTVPDGTRTIDFLVALNRAINADVGYCVRMEPGVQTPDFTLRTGVGSCRDSAWLLVSILRQFGLAARFVS GYLVQLASDIEALDGPSGPAADFTDLHAWSEAYIPGAGWIGLDPTSGLLAGEGHIPLAATPHPASAAPISGGTDLCDTVL EFSNTVTRVHEDPRVTLPYTDESWKTICEVGQRVDERLAAADVRLTVGGEPTFVSVDNQVAEEWRTAADGPHKRERASDL AARLKAVWAPQGLIHRGQGRWYPGEPLPRWQIALYWRTDGRPLWTNDALLADPWGAPPADPVDDDAAYRVLAGIADGLGL PISQVRPAYEDPLSRLAAAVRMPAGDPVESGDDLGCDTNPDTPTGRAALLAPR >Mature_532_residues PLRPTQVSSTGRTRCAGRSGVISSAAMSIKVALEHRTSYTFDRLVRVYPHIVRLRPAPHSRTSIEAYSLRIEPADHFINW QQDALGNFLARLVFPNPMRQLRITVGLIADLKVINPFDFFIEDWAEIWPCAGMAYPKALADDLRPYLRPVDEDGDGSGPG ELTQAWVRNFTVPDGTRTIDFLVALNRAINADVGYCVRMEPGVQTPDFTLRTGVGSCRDSAWLLVSILRQFGLAARFVSG YLVQLASDIEALDGPSGPAADFTDLHAWSEAYIPGAGWIGLDPTSGLLAGEGHIPLAATPHPASAAPISGGTDLCDTVLE FSNTVTRVHEDPRVTLPYTDESWKTICEVGQRVDERLAAADVRLTVGGEPTFVSVDNQVAEEWRTAADGPHKRERASDLA ARLKAVWAPQGLIHRGQGRWYPGEPLPRWQIALYWRTDGRPLWTNDALLADPWGAPPADPVDDDAAYRVLAGIADGLGLP ISQVRPAYEDPLSRLAAAVRMPAGDPVESGDDLGCDTNPDTPTGRAALLAPR
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58029; Mature: 57898
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRPTQVSSTGRTRCAGRSGVISSAAMSIKVALEHRTSYTFDRLVRVYPHIVRLRPAPH CCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHHHHHHHEEECCCCC SRTSIEAYSLRIEPADHFINWQQDALGNFLARLVFPNPMRQLRITVGLIADLKVINPFDF CCCCEEEEEEEECCHHHHCCCCHHHHHHHHHHHHCCCHHHHHEEHHHHHCCEEECCHHHH FIEDWAEIWPCAGMAYPKALADDLRPYLRPVDEDGDGSGPGELTQAWVRNFTVPDGTRTI HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH DFLVALNRAINADVGYCVRMEPGVQTPDFTLRTGVGSCRDSAWLLVSILRQFGLAARFVS HHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GYLVQLASDIEALDGPSGPAADFTDLHAWSEAYIPGAGWIGLDPTSGLLAGEGHIPLAAT HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEECC PHPASAAPISGGTDLCDTVLEFSNTVTRVHEDPRVTLPYTDESWKTICEVGQRVDERLAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH ADVRLTVGGEPTFVSVDNQVAEEWRTAADGPHKRERASDLAARLKAVWAPQGLIHRGQGR HCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCC WYPGEPLPRWQIALYWRTDGRPLWTNDALLADPWGAPPADPVDDDAAYRVLAGIADGLGL CCCCCCCCCEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC PISQVRPAYEDPLSRLAAAVRMPAGDPVESGDDLGCDTNPDTPTGRAALLAPR CHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure PLRPTQVSSTGRTRCAGRSGVISSAAMSIKVALEHRTSYTFDRLVRVYPHIVRLRPAPH CCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHHHHHHHEEECCCCC SRTSIEAYSLRIEPADHFINWQQDALGNFLARLVFPNPMRQLRITVGLIADLKVINPFDF CCCCEEEEEEEECCHHHHCCCCHHHHHHHHHHHHCCCHHHHHEEHHHHHCCEEECCHHHH FIEDWAEIWPCAGMAYPKALADDLRPYLRPVDEDGDGSGPGELTQAWVRNFTVPDGTRTI HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH DFLVALNRAINADVGYCVRMEPGVQTPDFTLRTGVGSCRDSAWLLVSILRQFGLAARFVS HHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GYLVQLASDIEALDGPSGPAADFTDLHAWSEAYIPGAGWIGLDPTSGLLAGEGHIPLAAT HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEECC PHPASAAPISGGTDLCDTVLEFSNTVTRVHEDPRVTLPYTDESWKTICEVGQRVDERLAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH ADVRLTVGGEPTFVSVDNQVAEEWRTAADGPHKRERASDLAARLKAVWAPQGLIHRGQGR HCEEEEECCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCC WYPGEPLPRWQIALYWRTDGRPLWTNDALLADPWGAPPADPVDDDAAYRVLAGIADGLGL CCCCCCCCCEEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC PISQVRPAYEDPLSRLAAAVRMPAGDPVESGDDLGCDTNPDTPTGRAALLAPR CHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA