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The map label for this gene is lppS

Identifier: 121638401

GI number: 121638401

Start: 2797905

End: 2799131

Strand: Reverse

Name: lppS

Synonym: BCG_2539c

Alternate gene names: NA

Gene position: 2799131-2797905 (Counterclockwise)

Preceding gene: 121638403

Following gene: 121638400

Centisome position: 63.99

GC content: 65.12

Gene sequence:

>1227_bases
ATGCCAAAGGTGGGGATTGCAGCTCAGGCGGGTAGGACCAGGGTTCGGAGAGCCTGGTTAACCGCGCTGATGATGACCGC
CGTGATGATCGGTGCCGTCGCATGCGGCAGCGGCCGCGGACCCGCACCGATCAAGGTCATCGCGGACAAGGGCACGCCGT
TCGCCGATCTGCTGGTGCCCAAGCTCACCGCGTCGGTCACCGACGGCGCCGTCGGCGTCACCGTGGATGCACCGGTGTCG
GTGACCGCCGCCGACGGTGTGCTGGCGGCCGTCACCATGGTCAACGACAACGGCAGGCCGGTGGCCGGTCGACTCAGCCC
CGACGGACTGCGCTGGTCGACCACTGAGCAGCTCGGCTACAACAGGCGCTACACGCTGAACGCGACGGCGCTTGGACTGG
GTGGCGCGGCGACCCGCCAGCTGACCTTCCAGACCAGTTCCCCCGCGCACCTGACCATGCCCTACGTCATGCCCGGTGAT
GGGGAGGTCGTGGGTGTCGGCGAGCCGGTGGCGATCCGATTCGACGAGAACATCGCTGACCGGGGCGCGGCCGAGAAGGC
CATCAAGATCACCACCAACCCGCCCGTGGAGGGCGCGTTCTACTGGCTGAATAACCGTGAAGTGCGTTGGCGCCCAGAGC
ATTTCTGGAAGCCAGGTACGGCCGTTGATGTGGCGGTCAACACCTACGGCGTCGACTTGGGCGAGGGAATGTTCGGCGAG
GACAACGTGCAGACGCACTTCACCATCGGCGACGAGGTGATCGCGACCGCCGACGACAACACCAAGATACTGACCGTGCG
GGTGAATGGCGAGGTCGTAAAGTCCATGCCGACGTCGATGGGCAAGGACAGCACCCCGACGGCCAACGGCATATACATCG
TCGGCTCGCGGTACAAGCACATCATCATGGATTCGTCCACCTACGGCGTACCCGTCAACTCGCCCAACGGATATCGCACC
GATGTCGACTGGGCCACCCAGATCTCCTACAGCGGTGTCTTCGTGCACTCAGCGCCGTGGTCGGTGGGGGCTCAGGGCCA
CACCAACACCAGCCATGGCTGCCTGAACGTCAGCCCGAGCAACGCGCAGTGGTTCTACGACCATGTCAAGCGCGGCGACA
TCGTCGAGGTGGTCAATACCGTGGGTGGCACCCTGCCGGGGATCGACGGGCTCGGCGATTGGAACATTCCGTGGGACCAG
TGGCGCGCCGGTAACGCCAAGGCGTAA

Upstream 100 bases:

>100_bases
CTGAACTTGGTATCAGCATCGCAGCGTGGCGGCCAGTCAGGACCTAGACTACAGCCGAGTCTAGCTCGGTCACGACGCAG
TGGGGGAGGTGAGGGAAGGC

Downstream 100 bases:

>100_bases
GCGCGCCGCGAGGAACGCCAGACAACCAACAGCGCCTGATACACGCCCTGCAACGACCGCATGGTTCGTTGTACGACGAT
GACATCCGATGGCCGCAGTG

Product: putative lipoprotein lppS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACGSGRGPAPIKVIADKGTPFADLLVPKLTASVTDGAVGVTVDAPVS
VTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGD
GEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGE
DNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRT
DVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQ
WRAGNAKA

Sequences:

>Translated_408_residues
MPKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACGSGRGPAPIKVIADKGTPFADLLVPKLTASVTDGAVGVTVDAPVS
VTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGD
GEVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGE
DNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRT
DVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQ
WRAGNAKA
>Mature_407_residues
PKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACGSGRGPAPIKVIADKGTPFADLLVPKLTASVTDGAVGVTVDAPVSV
TAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGYNRRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDG
EVVGVGEPVAIRFDENIADRGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGED
NVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKHIIMDSSTYGVPVNSPNGYRTD
VDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPSNAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQW
RAGNAKA

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 43366; Mature: 43235

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACGSGRGPAPIKVIADKGTPFADLLVP
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCHHHHHHH
KLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGY
HHHCCCCCCEEEEEECCCEEEEECCCEEEEEEEECCCCCEEECCCCCCCCEECCHHHHCC
NRRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIAD
CCEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCEEECCCCEEEEECCCCCC
RGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGE
CCCCCCEEEEECCCCCCEEEEEECCCEEEECHHHHCCCCCEEEEEEEEECCCCCCCCCCC
DNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKH
CCCEEEEEECCEEEEECCCCCEEEEEEECCCEEECCCHHCCCCCCCCCCCEEEEECCEEE
IIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPS
EEEECCCCCEECCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEECCC
NAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA
CCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
PKVGIAAQAGRTRVRRAWLTALMMTAVMIGAVACGSGRGPAPIKVIADKGTPFADLLVP
CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCHHHHHHH
KLTASVTDGAVGVTVDAPVSVTAADGVLAAVTMVNDNGRPVAGRLSPDGLRWSTTEQLGY
HHHCCCCCCEEEEEECCCEEEEECCCEEEEEEEECCCCCEEECCCCCCCCEECCHHHHCC
NRRYTLNATALGLGGAATRQLTFQTSSPAHLTMPYVMPGDGEVVGVGEPVAIRFDENIAD
CCEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCEEECCCCEEEEECCCCCC
RGAAEKAIKITTNPPVEGAFYWLNNREVRWRPEHFWKPGTAVDVAVNTYGVDLGEGMFGE
CCCCCCEEEEECCCCCCEEEEEECCCEEEECHHHHCCCCCEEEEEEEEECCCCCCCCCCC
DNVQTHFTIGDEVIATADDNTKILTVRVNGEVVKSMPTSMGKDSTPTANGIYIVGSRYKH
CCCEEEEEECCEEEEECCCCCEEEEEEECCCEEECCCHHCCCCCCCCCCCEEEEECCEEE
IIMDSSTYGVPVNSPNGYRTDVDWATQISYSGVFVHSAPWSVGAQGHTNTSHGCLNVSPS
EEEECCCCCEECCCCCCCCCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEECCC
NAQWFYDHVKRGDIVEVVNTVGGTLPGIDGLGDWNIPWDQWRAGNAKA
CCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]