| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638398
Identifier: 121638398
GI number: 121638398
Start: 2795140
End: 2796387
Strand: Reverse
Name: 121638398
Synonym: BCG_2536c
Alternate gene names: NA
Gene position: 2796387-2795140 (Counterclockwise)
Preceding gene: 121638399
Following gene: 121638397
Centisome position: 63.92
GC content: 65.87
Gene sequence:
>1248_bases GTGGGTATCGGCCATCCAATGTGGGTGGGGTGGTGCATCATCATTGCCATGCGGTCGATTCCCGCTTCGGTGGAGAGCTC GGTGCTCCGTTGGGCTCGCGAGTCGTGTGGCCTGACCGAGGTAGCCGCGGCCCGCAAACTCGGCCTGCCTGATGATCGCG TCGCGGCTTGGGAGGTGGGCGAGGTTGTGCCAACCATCGCGCAGCTGCGCAAGGCCGCCGAGGTCTACAAGCGCTCGCTG GCGGTGTTCTTCCTGTCCGAGCCGCCCGAGGGGTTTGACACCTTACGCGACTTCCGACGATTGGACGGTGCCGCGTCGGG TCAATGGACGCCGGGGCTTCACGAGGAGTTCCGTCGCGCACACACGCAACGCGACTTCGCGCTAGAGCTGGCCGACGCCG AGGACCGGGAGATACCGGGCGCCTGGCGTTTGCCCCTATCCGGCGACGAGGCCGACGCGGATATCGCGGCACGAATCCGC AAGGCCTTGATCGAGGTCAGCCCGTTGCCTATCCCCGTGGCCTCGGTTGACCCTTACGAGCATCTGAACGCCTGGGTGTC GGCCATCGAAACGTCCGGCGTTCTGGTGCTCGCGACCCGCGGCGGCAAGGTCGCTATCGACGAGATGCGCGGTATGTGTC TGTATTTCGACGAATTGCCGGTGATCGTGCTCAATGGCAGCGACCACCCCCGCCCTCGCCTGTTCTCGCTGCTGCATGAG TTCGTGCACGTGGTGCTGCACACCGAGGGCTTGTGTGACGTGATCGCCGATGCTCATCCGAGCACCCAGGACCGATCGCT GGAGGCTCGATGCAACGCGATCGCCGCCGCTGTGCTGATGCCTGCCGACGTGGTGCGAGCGCGGCCGGAGGTCATCGTTC GCAGCGAGACTCCGTCTTCGTGGGATTACGAATCGCTGCGGCCGGTCGCGGCGCATTTTGGCGTGAGTGCCGAGGCGTTC CTGCGGCGGCTAAGCACGCTTGGAATCGTGCCGGTCGAGGTCTACCGACAGCGCCGCGCCGAGTTCATCGCGGCTCACGA GGACGAGGCCGAACGGGCTCGATCGGCTGGGGGCGGCAACTGGTACCGCAATACCGTCCGAGACCTCGGCAAGGGCTACG TGCGGGCGGTGACCGACGCCCACCGCCGCCGCGTCATCGACAGCAACACCGCTGCGATCTACCTCGACGCCAAGGTCAGC CAGATTCCGAAGTTGGCTGAGTCAGCCGAACTGCGGAGCGTGGTCTAA
Upstream 100 bases:
>100_bases GCAGCCGGTCTCACGGCACACCGTCCCAGACGCCGAACGCGGCGAGTACCGTCTCGCCAGGTTGCGGGGGAGCGGTTAAT CGGCTGGTCGGGAACCAAGC
Downstream 100 bases:
>100_bases CCGCTGTGCTCTATTCCTTCGATACCAGCGCCATCCTGAACGGACGGCGTGATCTGTTTCGGCCAGCGGTGTTTCGCAGT CTGTGGGGCCGGGTTGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSL AVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIR KALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAF LRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVS QIPKLAESAELRSVV
Sequences:
>Translated_415_residues MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSL AVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIR KALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAF LRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVS QIPKLAESAELRSVV >Mature_414_residues GIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVGEVVPTIAQLRKAAEVYKRSLA VFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRAHTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRK ALIEVSPLPIPVASVDPYEHLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHEF VHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSSWDYESLRPVAAHFGVSAEAFL RRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGNWYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQ IPKLAESAELRSVV
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45800; Mature: 45668
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50943 HTH_CROC1 ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHH EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA HHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE HCCCCCEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE HHHHHHHHHHCCCEEEEEECCCEEEHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHH FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS HHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCH WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIGHPMWVGWCIIIAMRSIPASVESSVLRWARESCGLTEVAAARKLGLPDDRVAAWEVG CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHH EVVPTIAQLRKAAEVYKRSLAVFFLSEPPEGFDTLRDFRRLDGAASGQWTPGLHEEFRRA HHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH HTQRDFALELADAEDREIPGAWRLPLSGDEADADIAARIRKALIEVSPLPIPVASVDPYE HCCCCCEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH HLNAWVSAIETSGVLVLATRGGKVAIDEMRGMCLYFDELPVIVLNGSDHPRPRLFSLLHE HHHHHHHHHHCCCEEEEEECCCEEEHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHH FVHVVLHTEGLCDVIADAHPSTQDRSLEARCNAIAAAVLMPADVVRARPEVIVRSETPSS HHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC WDYESLRPVAAHFGVSAEAFLRRLSTLGIVPVEVYRQRRAEFIAAHEDEAERARSAGGGN CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCH WYRNTVRDLGKGYVRAVTDAHRRRVIDSNTAAIYLDAKVSQIPKLAESAELRSVV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA