| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is aglA [H]
Identifier: 121638354
GI number: 121638354
Start: 2738734
End: 2740374
Strand: Direct
Name: aglA [H]
Synonym: BCG_2491
Alternate gene names: 121638354
Gene position: 2738734-2740374 (Clockwise)
Preceding gene: 121638353
Following gene: 121638355
Centisome position: 62.61
GC content: 67.28
Gene sequence:
>1641_bases ATGGACCAACACCAGCGACCGGATCCAATGGGCCCCGGCTCTCCTCGCGCCAGCGCTCGTCGACCGGAGCCAGATCCGAT GGGCGAGCCGTGGTGGTCGCGAGCCGTGTTCTACCAGGTCTATCCCCGATCGTTCGCCGACAGCAACGGCGACGGGGTGG GCGACCTGGACGGGTTGGCGAGCCGGCTTGACCACCTGCAACAGCTCGGTGTCGACGCGATCTGGATCAACCCGGTCACC GTCTCGCCGATGGCAGACCACGGATACGACGTCGCCGATCCCCGCGACATCGACCCACTCTTCGGCGGGATGCCGGCGTT CGAACGGTTGGTCGCTGCGGCACACCGGCAGGGCATCAAAGTCACCATGGACGTGGTGCCCAACCACACCAGTTCGGCGC ACCCATGGTTTCAGGCCGCGCTGGCTGACCTCCCGGGTAGCCCGGCGCGGGATCGCTATTTCTTTCGCGACGGGCGGGGC CCCGACGGGTCGCTGCCGCCGAACAACTGGGAGTCGGTGTTCGGCGGGCCGGCCTGGACCCGAGTGCGCGAACCGGACGG CAACCCGGGCCAGTGGTACCTGCACCTTTTCGACACCGAACAGCCGGACCTGAACTCGGACAACCCGGAAATCCTTGACG ACTTCGAGAAAACACTGCGCTTCTGGCTGGACCGCGGCGTGGATGGCTTCCGCATCGACGTGGCGCACGGCATGGCCAAG CCCCCGGGCCTGCCGGACTCACCGGACCTGGGCATCGAGGTGCTGCACCACCGCGATGACGACCCGCGCTTCAACCACCC GAATGTGCACGCGATTCACCGCGACATCCGCACGGTGATCGACGAGTACCCCGGAGCGGTAACCGTCGGCGAGGTGTGGG TACACGACAACGCCCGCTGGGCGGAGTATCTGCGGCCCGACGAACTGCATCTCGGCTTCAATTTCCGGCTGGCGCGAACC GAGTTCGACGCCGCCGAGATCCGCGACGCGGTGGCGAACTCCCTGGCCGCCGCGGCGCTGCAGAACGCGACCCCAACCTG GACGCTGGCCAATCACGATGTGGGACGGGAGGTTAGCCGCTACGGCGGCGGCGAGATCGGGCTGCGCCGGGCCAAGGCGA TGGCGGTGGTGATGCTCGCCCTGCCGGGCGTGGTCTTCCTCTACAACGGCCAGGAACTGGGTTTGCCCGACGTGGACCTG CCCGACGAGGTGCTGCAGGATCCGACGTGGGAACGCTCGGGACGCACCGAACGCGGTCGCGATGGCTGCCGGGTGCCGAT TCCCTGGTCGGGCAACATTCCCCCGTTCGGGTTCTCGACGTGTCCAGACACCTGGTTGCCGATGCCGCCGGAATGGGCGG CGCTGACCGCCGAAAAACAACGCGCTGATGCCGGCTCGACCTTGTCGTTTTTTCGACTTGCACTCAGATTACGTAGGGAA CGAAATGAATTCGACGGCGACGTCGACTGGCTGGCCGCGCCCGACGATGCGCTGATATTCCGGCGTCACGGCGGGGGTTT GGTGTGCGCGCTCAACGCCGCTGAGCGTCCGCTGGCGCTGCCGGCAGGTGAACCCATCCTGGCCAGCGCACCGTTGACCG ACGCCACGTTGCCACCCAATGCCGCGGCCTGGCTGGTGTAG
Upstream 100 bases:
>100_bases TGGCCTCCATCGACTCAGAAACGCTCGATGACGAGCACCGTCGAGAGTTGCTGGATTATCTGGAGATGGCCGCTCACTCG CTGGTCAACTCCCCGTTTTG
Downstream 100 bases:
>100_bases CGGCATTCCGAGCTATGCCTGCCCGACATATAAGCGCATACGCATCCTAGGCGGGCACCGTCTAGGTATGATGATGCGGA TCGCCGTGCGGCTACCCGGG
Product: putative alpha-glucosidase aglA
Products: NA
Alternate protein names: Dextrin 6-alpha-D-glucanohydrolase; Oligosaccharide alpha-1,6-glucosidase; Sucrase-isomaltase; Isomaltase [H]
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVT VSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRG PDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNSDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAK PPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYLRPDELHLGFNFRLART EFDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRRAKAMAVVMLALPGVVFLYNGQELGLPDVDL PDEVLQDPTWERSGRTERGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE RNEFDGDVDWLAAPDDALIFRRHGGGLVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV
Sequences:
>Translated_546_residues MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVT VSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRG PDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNSDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAK PPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYLRPDELHLGFNFRLART EFDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRRAKAMAVVMLALPGVVFLYNGQELGLPDVDL PDEVLQDPTWERSGRTERGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE RNEFDGDVDWLAAPDDALIFRRHGGGLVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV >Mature_546_residues MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVT VSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRG PDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNSDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAK PPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYLRPDELHLGFNFRLART EFDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRRAKAMAVVMLALPGVVFLYNGQELGLPDVDL PDEVLQDPTWERSGRTERGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE RNEFDGDVDWLAAPDDALIFRRHGGGLVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=469, Percent_Identity=30.7036247334755, Blast_Score=224, Evalue=1e-58, Organism=Escherichia coli, GI1790687, Length=480, Percent_Identity=36.4583333333333, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1786604, Length=577, Percent_Identity=23.050259965338, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI32565753, Length=560, Percent_Identity=23.3928571428571, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI25147709, Length=530, Percent_Identity=24.7169811320755, Blast_Score=95, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322245, Length=499, Percent_Identity=34.0681362725451, Blast_Score=273, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6319776, Length=576, Percent_Identity=31.7708333333333, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321726, Length=508, Percent_Identity=33.4645669291339, Blast_Score=253, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6321731, Length=576, Percent_Identity=31.5972222222222, Blast_Score=253, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6322241, Length=508, Percent_Identity=33.4645669291339, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6322021, Length=508, Percent_Identity=33.4645669291339, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6324416, Length=508, Percent_Identity=33.4645669291339, Blast_Score=244, Evalue=4e-65, Organism=Drosophila melanogaster, GI24583749, Length=483, Percent_Identity=36.4389233954451, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI24583747, Length=483, Percent_Identity=36.4389233954451, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI221330053, Length=553, Percent_Identity=32.9113924050633, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI24586599, Length=538, Percent_Identity=32.3420074349442, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24586589, Length=507, Percent_Identity=35.5029585798817, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24586597, Length=512, Percent_Identity=33.0078125, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24583745, Length=483, Percent_Identity=33.7474120082816, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24586591, Length=506, Percent_Identity=32.2134387351779, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24586587, Length=469, Percent_Identity=31.9829424307036, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI45549022, Length=546, Percent_Identity=30.5860805860806, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24586593, Length=508, Percent_Identity=32.8740157480315, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI281360393, Length=455, Percent_Identity=29.4505494505495, Blast_Score=163, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =3.2.1.10 [H]
Molecular weight: Translated: 60345; Mature: 60345
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCHHHCCCCCCCCCCHHHHH SRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIK HHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCE VTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWT EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCC RVREPDGNPGQWYLHLFDTEQPDLNSDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAK EEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCC PPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARW CCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHH AEYLRPDELHLGFNFRLARTEFDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSR HHHCCCCCEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHH YGGGEIGLRRAKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQDPTWERSGRTERGR HCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC DGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RNEFDGDVDWLAAPDDALIFRRHGGGLVCALNAAERPLALPAGEPILASAPLTDATLPPN HHHCCCCCEEEECCCCEEEEEECCCCEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCC AAAWLV CCCCCC >Mature Secondary Structure MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCHHHCCCCCCCCCCHHHHH SRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIK HHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCE VTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWT EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCC RVREPDGNPGQWYLHLFDTEQPDLNSDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAK EEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCC PPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARW CCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHH AEYLRPDELHLGFNFRLARTEFDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSR HHHCCCCCEEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHH YGGGEIGLRRAKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQDPTWERSGRTERGR HCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC DGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RNEFDGDVDWLAAPDDALIFRRHGGGLVCALNAAERPLALPAGEPILASAPLTDATLPPN HHHCCCCCEEEECCCCEEEEEECCCCEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCC AAAWLV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1761534 [H]