| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638307
Identifier: 121638307
GI number: 121638307
Start: 2687056
End: 2688498
Strand: Reverse
Name: 121638307
Synonym: BCG_2442c
Alternate gene names: NA
Gene position: 2688498-2687056 (Counterclockwise)
Preceding gene: 121638308
Following gene: 121638306
Centisome position: 61.46
GC content: 66.53
Gene sequence:
>1443_bases GTGGCCGCCCGTCGTATTCGTGCTGCCCGGCCACTCGCCCCGCATGGGCTGCCCGGACACTTGGTGGGCTTTGTGGAAGC GCTGCGTGGCAGCGGGATTTCGGTGGGCCCGTCAGAGACGGTGGATGCCGGCCGGGTGATGGCCACCCTCGGGCTGGGTG ATCGTGAGGTGTTGCGGGAGGGCATTGCTTGTGCGGTGCTGCGCCGGCCTGACCACCGCGATACCTATGACGCCATGTTC GACCTGTGGTTTCCCGCGGCACTGGGGGCTCGGGCGGTCATCACCACGGAAGACGAGTCGGCAGGCTCCGGGGGTTTGCC GCCCGATGATGTCGAGGCTATGCGGCAGCTGCTGCTGGATCTGCTGGCCAACAACCAAGACCTGGCCGGCAAGGACGAGC GGTTGGTGGAGATGATCGCGCGGATCGTTGAGGCCTATGGCAAGTACAGTTCCAGCCGCGGTCCGTCGTTCTCGTCGTAT CAGGCACTCAAGGCCATGGCGCTGGACGAACTGGAGGGCAAGCTACTGGCGGGCCTGCTTGCTCCCTACGGCGATGAGCC CACAGCCACCCAGGAACAGATTGCCAAAGCGCTTGCCGCACAAAAGATCGCGCAGCTGCGCAGAATGGTCGACGCCGAGA CCAAGCGGCGCACAGCCGAGCAACTCGGCCGCGAGCACGTCCAGATGTACGGAATTCCACAGCTTTCCGAGAACGTCGAG TTTCTGCGTGCCTCGGGTGAGCAGCTGCGCCAGATGCGCCGGGTGGTGGCCCCGTTGGCCCGCACCCTGGCGACCCGGTT GGCCGCCCGGCGGCGCCGCGCCCGCGCGGGATCGATCGATCTGCGCAAGACGCTGCGCAAGTCGATGTCCACCGGCGGCG TGCCGATCGACCTGGTGTTGCACAAACCCCGCCCGGCGCGCCCGGAACTCGTCGTGTTGTGCGACGTGTCGGGCTCGGTC GCGGGCTTCAGCCACTTCACGCTGCTGCTGGTACACGCGCTGCGCCAACAGTTCTCCCGGGTTCGCGTCTTCGCCTTCAT CGACTCCACCGACGAGGTGACCCATATGTTCGGGCCGGAATCGGACCTGGCCATAGCGATCCAGCGGATCACCCGGGAGG CTGGTGTGTATGCCCGCGACGGCCATTCCGACTACGGCAACGCGTTCGTCTCGTTCATGCAGGGCTTCCCAAATGTGCTG TCGCCGCGCAGCTCGCTGCTGGTGCTTGGTGACGGGCGCACCAACTACCGCAACCCGGCCACCGACGTGCTGGCCGACAT GGTGACCGCCAGCCGGCACGCGCACTGGCTCAACCCGGAGCCCAAGCATCTGTGGGGCAGCGGTGACTCGGCGGTGCCGC GCTACCAAGAGGTGATCACGATGCACGAATGCCGATCCGCCAAGCAGCTGGCCACGGTGATCGACCAGCTACTGCCGGTG TAG
Upstream 100 bases:
>100_bases TGGACACCATCGACGATGCGGTCGTTGCCGCCACGCTCGGCGTGGTTCTCAAGCACCAATCCGACCAGCAACGGGCCACC GGAGAGCTCAGGTTGAACTA
Downstream 100 bases:
>100_bases GCCGGGCGGGCAGTCGTAAAAGAACATGATGGGCGCTGGTGCGCCCGCTTATCACGCGTTGTTGGCCCACGGCGAGTGAG CTGCTGGTGTGCAATGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like; Von Willebrand Factor Type A Domain-Containing Protein; VWA Containing CoxE-Like Protein; Vwa Containing Coxe Family Protein; VWA Domain-Containing Protein; Vwa Domain Coxe-Like Protein; VWA Domain Protein
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MAARRIRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMATLGLGDREVLREGIACAVLRRPDHRDTYDAMF DLWFPAALGARAVITTEDESAGSGGLPPDDVEAMRQLLLDLLANNQDLAGKDERLVEMIARIVEAYGKYSSSRGPSFSSY QALKAMALDELEGKLLAGLLAPYGDEPTATQEQIAKALAAQKIAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVE FLRASGEQLRQMRRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVLHKPRPARPELVVLCDVSGSV AGFSHFTLLLVHALRQQFSRVRVFAFIDSTDEVTHMFGPESDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVL SPRSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPKHLWGSGDSAVPRYQEVITMHECRSAKQLATVIDQLLPV
Sequences:
>Translated_480_residues MAARRIRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMATLGLGDREVLREGIACAVLRRPDHRDTYDAMF DLWFPAALGARAVITTEDESAGSGGLPPDDVEAMRQLLLDLLANNQDLAGKDERLVEMIARIVEAYGKYSSSRGPSFSSY QALKAMALDELEGKLLAGLLAPYGDEPTATQEQIAKALAAQKIAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVE FLRASGEQLRQMRRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVLHKPRPARPELVVLCDVSGSV AGFSHFTLLLVHALRQQFSRVRVFAFIDSTDEVTHMFGPESDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVL SPRSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPKHLWGSGDSAVPRYQEVITMHECRSAKQLATVIDQLLPV >Mature_479_residues AARRIRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMATLGLGDREVLREGIACAVLRRPDHRDTYDAMFD LWFPAALGARAVITTEDESAGSGGLPPDDVEAMRQLLLDLLANNQDLAGKDERLVEMIARIVEAYGKYSSSRGPSFSSYQ ALKAMALDELEGKLLAGLLAPYGDEPTATQEQIAKALAAQKIAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVEF LRASGEQLRQMRRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVLHKPRPARPELVVLCDVSGSVA GFSHFTLLLVHALRQQFSRVRVFAFIDSTDEVTHMFGPESDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVLS PRSSLLVLGDGRTNYRNPATDVLADMVTASRHAHWLNPEPKHLWGSGDSAVPRYQEVITMHECRSAKQLATVIDQLLPV
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52591; Mature: 52460
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARRIRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMATLGLGDREVLRE CCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH GIACAVLRRPDHRDTYDAMFDLWFPAALGARAVITTEDESAGSGGLPPDDVEAMRQLLLD HHHEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH LLANNQDLAGKDERLVEMIARIVEAYGKYSSSRGPSFSSYQALKAMALDELEGKLLAGLL HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH APYGDEPTATQEQIAKALAAQKIAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FLRASGEQLRQMRRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEE HKPRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDSTDEVTHMFGPE ECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCC SDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVLSPRSSLLVLGDGRTNYRNPA CHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCCHH TDVLADMVTASRHAHWLNPEPKHLWGSGDSAVPRYQEVITMHECRSAKQLATVIDQLLPV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AARRIRAARPLAPHGLPGHLVGFVEALRGSGISVGPSETVDAGRVMATLGLGDREVLRE CCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH GIACAVLRRPDHRDTYDAMFDLWFPAALGARAVITTEDESAGSGGLPPDDVEAMRQLLLD HHHEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH LLANNQDLAGKDERLVEMIARIVEAYGKYSSSRGPSFSSYQALKAMALDELEGKLLAGLL HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH APYGDEPTATQEQIAKALAAQKIAQLRRMVDAETKRRTAEQLGREHVQMYGIPQLSENVE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FLRASGEQLRQMRRVVAPLARTLATRLAARRRRARAGSIDLRKTLRKSMSTGGVPIDLVL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEE HKPRPARPELVVLCDVSGSVAGFSHFTLLLVHALRQQFSRVRVFAFIDSTDEVTHMFGPE ECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCC SDLAIAIQRITREAGVYARDGHSDYGNAFVSFMQGFPNVLSPRSSLLVLGDGRTNYRNPA CHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEECCCCCCCCHH TDVLADMVTASRHAHWLNPEPKHLWGSGDSAVPRYQEVITMHECRSAKQLATVIDQLLPV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA